| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1260 |
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| Symbol | |
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| ID | 6275415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1520651 |
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| End bp | 1522081 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642613317 |
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| Product | glycoside hydrolase family 37 |
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| Protein accession | YP_001877866 |
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| Protein GI | 187735754 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGG ATTGGAAAAA AGAGATTCCC CTGCCAGTAT ATCCAAACCG GGAAATGACG
GAACTTTATC ATCAAACATG GGAAATTGCG GCTGGGCGCG TCAGGAAAGG GCCGGAAGGG
CTCCCCGCGT CTCCCTATAT GGATGAAAAT TGCTACGAAG ATCAAATCTG GATATGGGAC
ACCTGTTTCA TGGTGCTTTT TGCCAAGTAT GCGCCCAGGG CGTTTCCCGG AATAGAAAGT
CTGGATAATC TTTACAAACC TATCCATGAA AAAGCCGCTA CGCCCCTTAG AATCCATTTA
GTGGATAATC CCCCGCTGTT TGCTTGGGTG GAAAAGGAAT ATTTTGATTT CACAGGAGAT
AAGAGGCGGC TTAATCATCT TCTTAATGAA AAGCGGTATT TGCAGAAGCA TTTCAAATGG
TTTGCCCGGG CTAAGGCTGG TGAACGGTTT GAATGTTCCC CCCAGCGTAT TTACTTGAAT
TCCATTGGGG ATGATGGCTT TACCTGGACG GGGAGAGCGA GCGGTATGGA CAATACTCCC
CGCGGGCGTG ATGCCGGAGG ATACCATAAG GTGCTATGGG TGGATGCCAT TTCCCAGCAG
GCTCTTAGCG CCCACTGCAT TGCTACCATG GAACAGGCTT TGGGAAATGA GAATGAAGCA
AGAAAATGGA ACGCTGAATA TGAAGCGCTT AAGAAAAAGA TCAACCATCT TTACTGGGAT
GAGCGGGATG GATTTTATTA CGATGTCACC ATTGCGGACA AACAGCCCTG CCGCGTTAAA
ACCATTGCTT CCTATTGGCC CCTTCTGGCC CGGATTGCGT CCAGGGAACA GGCGCGGAGC
ATGGTAAATC ATCTGATGAA TCCCGGGGAA TTCGGAGGCA GTTATCCTAC TCCTTCCCTG
GCCCGCTCGG ATAAGGATTA TCATCATCAA ACCGGGGATT ACTGGCGGGG AGGAATTTGG
CTGCCGACGA CATATATGGC GATTAAGGCC ATTGAAAAGT ATGGCTACCA TGAGGAGGCC
GATGCTATTG CCGAGAAGGT TATCAACCAG CAGCTTGCCG CTTACAGGAA TATGGAACCG
CATACTGTCT GGGAGTGCTA TAGCCCAAGC GGAGATGCCC CCTCCACAGA ACACGGACGC
CGTGTAAGAC CGGAATTTTG CGGCTGGTCA GCCCTGGGGC CGATTGCGTT GTTTATTGAA
AATGTGCTGG GATTTAAGAA AGTGTCTGCC GCCGGAAAGG AAGTCCGGTG GAGGTTGAAA
AAAAACAAGG GCCGCCATGG AATCAGGAAT TTGAGGTTTG GCGATATTGT AACCGATATT
GTTTTTGATG GTAAAGGCAC GGTGTCGGTC ACGTCGAATG CTTCTTACTC TTTAATCATT
AATGGCAATA CTTATTCAGT AAGGAAGGGG GATACTGAAA TTAAGCTGTA A
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| Protein sequence | MNRDWKKEIP LPVYPNREMT ELYHQTWEIA AGRVRKGPEG LPASPYMDEN CYEDQIWIWD
TCFMVLFAKY APRAFPGIES LDNLYKPIHE KAATPLRIHL VDNPPLFAWV EKEYFDFTGD
KRRLNHLLNE KRYLQKHFKW FARAKAGERF ECSPQRIYLN SIGDDGFTWT GRASGMDNTP
RGRDAGGYHK VLWVDAISQQ ALSAHCIATM EQALGNENEA RKWNAEYEAL KKKINHLYWD
ERDGFYYDVT IADKQPCRVK TIASYWPLLA RIASREQARS MVNHLMNPGE FGGSYPTPSL
ARSDKDYHHQ TGDYWRGGIW LPTTYMAIKA IEKYGYHEEA DAIAEKVINQ QLAAYRNMEP
HTVWECYSPS GDAPSTEHGR RVRPEFCGWS ALGPIALFIE NVLGFKKVSA AGKEVRWRLK
KNKGRHGIRN LRFGDIVTDI VFDGKGTVSV TSNASYSLII NGNTYSVRKG DTEIKL
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