| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1240 |
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| Symbol | |
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| ID | 6275824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1487749 |
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| End bp | 1490136 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642613297 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001877846 |
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| Protein GI | 187735734 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.292436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCG CCGCCCAGGA AAATATTCCG GATGCCGCTC CCATCGCGGA TGGTCCGCTG
GTCGCTAATC CGGAGCAGGA TACGCTGGAT ATGGCGGACA TGCTGTACAA GCAGGCCCAG
GCTCCGGCTA CGAAGGAGAA CCGGCAGGAA TATGGACGCC TTCTTGATTT AAGCTTGCGT
AAATATCTGG AATTTACCCA ACGTTTTCCC CAGTCCGCCC AGGCTCCTCT GGCGGAGTAT
CGTGCTGCCA TGTGTTTGGA GGAGCTGGGC AGGAAAGATG AGGCACATGG CCTGTTCCTC
AGATTGATTC AGACGGGCAG CCCCGCCCTG GTTGCCGCCT CCGCCTACCG TCTGGCGACG
GATGCTTCTT CTGCCGGGGA GATAGATAAG GCCATCCAGT ATTACCAGCT CGTGATTCGC
AATGCGGAAC AGAATGATTT GAAGGTGGAC GCCCAGTACC GTCTGGGACG CCTGTTTCTT
TCCAGCGGTA ATCCGGAGGC AGCCGCCACC ATGTTTTGTG CGGTGATGGG CAATCCGGAA
GCGGATGCCA AGTTTGTTCT GGTGTCCCGG ATGGGATATG CCGCCCTGTG TGCGGATACG
GGACGCTTGG GAGAAGCTTA TTCCGAATAT CGCAAGGTGC TGGAAACGCC CGGTGTGGAT
AACAGGAACA GGGGAATCGC CACTCTTCAG GCCGCCATGC TGGCCACCAA ACTGAAAAAG
ACTGCGGAAG CCCAGGGCCT TTATGAACGG CTTTTGAAGG ACGAGTCCCT GAAGGAGATG
GCGCCGGAGG CCCGAATGGG GCTTCTTCTG GGGCTGTACA ATATGGGCAA GTACAGGGAG
ATACTTTCCC AGTATGAGCA GCAGAAGGGA ATAAAGATGC CGACAAAGGA CGGCCAGGTG
CGTCTGTTGA TGCTGCTGGG GCAGTCCGCC TATAAATTGA AGGAGTACCG GAAAGCGGCA
GATTTCTTTC TGGAAGCGGA AAAGTCCGTT CCTTATACGC AGGAGGCCAT GCAAGCCTCC
TTTTACCGGT TATTGTGTTA TAATGAACTT AAGCAGAAAG ATCTCCCCCA GCGGGCCCAG
AGCTTCCTGA ACCATTATGC CAAGGCTTTT CCTACCAGTG AGCTGCATGA TATGGTGCGC
CTGATGGCTG CAGAGAACCT GTTCAGCTCC AATCCGGCGG ATGCCGCCCG GTTTTATGCC
AGCATTGATT TTGACAAAGT GCCCCCGAAG ATGCGTGCGG ATATTTTATA TAAGAGCGCA
TGGGCGATTG CCCAGGCCGG GAACAGAGGT GTGGCCGCCA AGCTGCTGAC TGATTTTATC
AATGATTTTC CGAAAGATCC CCGCATTTGC GAGGCATTGA CGTTGCGTGG GGACATGTAT
GCCAAGACCA AGAAGGAAGC TGAGGCGCTG ATGGATTTTG ACCGTGTGAT TGCCCGCTGG
CCGAAAGCTG AATCAGCTGC CGCCGCATGG CAGAGAGCCG CTCAGATTTA TGCGGGACGC
CAGGATATGG CGAACATGGC GAAGTATTAT GAAGGCCTGA TTCAGAATTT TCCGAAGGCG
TCTCCTGCCG CTTTGGCTGA AGCCCATTTC CTGCTGGGGC GTGCGGCGTT TGACCAGGGA
GATTTCAAGT CTTCTATCAG CCATATGGCT GAGGCCAAGA CTCTGGATCC CCAGAAATAC
GGAGAACAGG TTAATGTGCT TTCCGTTCTG TCCTATCACA AGCTCCAGGA CGTGAATAAA
CTGAAGGAGG CCCTGGAAAC CCTGCAAAAG GAAAATCCTT CCGCCGTGGC TCGTGTGCCG
GATGTCATCC CCGCATGGCT GGGCCTTCAG GCCTATGGGA TGAAGGATCT GGAAACGGCG
GACAAGTATA TGACCTGGGC TACGCAGAAC GACCAGCTTC AGAATGTGAA GAAGGTGATT
TGGCGTAATT TGGCGAAGGT GCGCCTGGCG CTCAGAAAGT ATGACCGCGC CTTGGTGGCT
TCCAACAATT TTCTGAAGGA TGAGGACCAG CCTTACCGCC GTGCGGACGG CATGCTGGAC
AAGGCTTCCA TTTTGCTGGG GCTGGGCAAG TATGCGGATG CCAGGAAGAC GGCGGAAGAT
GCGCTGGCTC TGGGCGTGGA AGGTCCTCTG ATGGCTTCCT TGAAAATTGT TCTGGGGGAT
ATTTCCTATG CGGAGAAAAA GTTTGATGAA GCGGCCAAGC ATTACGGTGT TACGGCCGAG
CTGTTTGTCA ATGACGCCGA ACTGAAACCC AAGGCTCTCT TCAAGGCGGC GGAAGCTTTG
GACAAGGCCG GGCGCAAATC GGAGGCTTCC CAATACCGGG CCCGCCTGCA AAAGGAATTC
CCGGATTGGA AACAGGATGG AGAGTCTTTG CCTCCGGACG CACGATAA
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| Protein sequence | MFSAAQENIP DAAPIADGPL VANPEQDTLD MADMLYKQAQ APATKENRQE YGRLLDLSLR
KYLEFTQRFP QSAQAPLAEY RAAMCLEELG RKDEAHGLFL RLIQTGSPAL VAASAYRLAT
DASSAGEIDK AIQYYQLVIR NAEQNDLKVD AQYRLGRLFL SSGNPEAAAT MFCAVMGNPE
ADAKFVLVSR MGYAALCADT GRLGEAYSEY RKVLETPGVD NRNRGIATLQ AAMLATKLKK
TAEAQGLYER LLKDESLKEM APEARMGLLL GLYNMGKYRE ILSQYEQQKG IKMPTKDGQV
RLLMLLGQSA YKLKEYRKAA DFFLEAEKSV PYTQEAMQAS FYRLLCYNEL KQKDLPQRAQ
SFLNHYAKAF PTSELHDMVR LMAAENLFSS NPADAARFYA SIDFDKVPPK MRADILYKSA
WAIAQAGNRG VAAKLLTDFI NDFPKDPRIC EALTLRGDMY AKTKKEAEAL MDFDRVIARW
PKAESAAAAW QRAAQIYAGR QDMANMAKYY EGLIQNFPKA SPAALAEAHF LLGRAAFDQG
DFKSSISHMA EAKTLDPQKY GEQVNVLSVL SYHKLQDVNK LKEALETLQK ENPSAVARVP
DVIPAWLGLQ AYGMKDLETA DKYMTWATQN DQLQNVKKVI WRNLAKVRLA LRKYDRALVA
SNNFLKDEDQ PYRRADGMLD KASILLGLGK YADARKTAED ALALGVEGPL MASLKIVLGD
ISYAEKKFDE AAKHYGVTAE LFVNDAELKP KALFKAAEAL DKAGRKSEAS QYRARLQKEF
PDWKQDGESL PPDAR
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