| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1239 |
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| Symbol | |
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| ID | 6275828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1487261 |
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| End bp | 1487707 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642613296 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001877845 |
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| Protein GI | 187735733 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.371549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.35298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTC ATTATAAAAT GCCCAGTCCC ATCGGGTTTC AATTGGCCCC CATGCTGGAC
ATCGTATTTC TGCTGCTGGT GTTTTTCATC GTAACCCAGA CATTTGAGGA TGATGAACCG
GATCTTTCCA TCAATCTTCC TTCAGCAGAG ACTCCCAAGC CCGGTGAAAA CGTGTCCAAT
GAAATTATCG TGAATATCCG TAAAGATGGT ACCGTGGTAA TCAACCGCCA GCAGTACACA
ATGCCGCAGC TGGAAGACAA ACTTTTTTCC GTCGCCCGGT TGGACAAAAC CATGCTCGTC
CGTATCCGCG TGGATGAGAA GGCGGAATCC GGCGTGGTGG TGCATGTGAT GGACGCATGT
CTGAAGGCCG GGCTGAATAA CGTTTCTTTT TCCACGCGTC CTCCGGTTCC ATCTTCAATC
AATGTTTCCA ATTCCCAGGC TTCATGA
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| Protein sequence | MKFHYKMPSP IGFQLAPMLD IVFLLLVFFI VTQTFEDDEP DLSINLPSAE TPKPGENVSN
EIIVNIRKDG TVVINRQQYT MPQLEDKLFS VARLDKTMLV RIRVDEKAES GVVVHVMDAC
LKAGLNNVSF STRPPVPSSI NVSNSQAS
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