| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1228 |
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| Symbol | |
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| ID | 6275772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1475565 |
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| End bp | 1477763 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642613284 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_001877834 |
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| Protein GI | 187735722 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.0388635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTACC AGGTCTTTGC CAGAAAATAC CGTCCTCTGA CATTCGATGA CGTCCTTGGA
CAGGATCATG TTGTCCGGAC GTTGAAAAAC GCCATTGAGC ACAACCGTCT CGCCCATGCC
TATCTCTTTG TAGGTCCCCG TGGAACGGGA AAGACATCAA CCGCAAGAAT TTTTGCGAAA
GCTCTAAACT GCAGCGGTGG GCCCAAAGTG GATTTTGACC CGCATGAAGA TATATGTGAA
GAAATTGCAG AAGGGCGGAG CCTGGATGTT CTTGAAATAG ACGGAGCATC CAACCGCGGC
ATTGATCACA TCCGGGATCT CAGGGACAAC GTACGGTTCG CTCCGAGCAG AGGAAATTTC
CGTATCGTCT ATATAGATGA AGTGCACATG CTCACTAAGG AATCCTTCAA CGCCCTGCTC
AAAACGCTGG AAGAACCGCC ACCTCATGTC AAATTTATTT TCGCAACCAC GGAACCCCAT
AAAATACTGC CAACCATTCT ATCGCGATGC CAGCGCTTCG ACCTGCGCCC CATCCCTTCT
GAAATCATTG CAGAACACCT GCTCCATATC GCTTCTGCAG AGGGAGTAAG TTTGAGCAGG
GAAGCAGCCT TTGCTGTCGC CAAAGTGGCG GATGGAGGTA TGCGGGATGC ACAATCCATG
CTGGACCAGC TTGTTTCCTT CTGTGGAGAT CATATTGAAG AACAGCAGGT ACTCCACATT
TTCGGCATTA CTTCCCGGGA GACCGTGGCC CATGCTCTGG CGCTTATTTT GAACAAGGAA
CTTCCCTCTC TCCTGCATCT TCTGCATGAA CAGGCGGAAG CAGGAAGAGA CATGAGCCAG
TTCCTTTCCG AAATTATCTC CGCCGTGCGT GAAATCCTGG TCTCTAAAGT AGATCCAGAA
GCCAGCTTTG ATTCTCTCCC GGAATCCTCC AAGGAGGAAC TCGCCGAATT GGTCAAACGC
ACCCATACGG ACAAAATCCT GCGTTTGGTG GAAGTTCTGG CGGAAACGGA AGATAAAATG
CGCTGGTCCA CCAATAAAAG GCTTCATCTG GAAATGGGCC TGATTAAAGC CGTTCATACT
CTGGCTGAGG CCAGCATCAG CGATATTATC ATGGCGTTGG AAGGTGCTCC GCTAGCCACC
GCGGCACCGG CCTCTTCTTC AGATCTTGCT TCACAGCAGG AACCAAGTAC ATTTATTTCC
TCCGCCACGG CACCCACTCC GGCCCCCCGG CAAAACATCC AGTCTCCTGT TGCTGCAACA
AACCCAACCC CAGCTACGGA AGAACATTTG ATGGATCCGA TTCCAGATTT TTCTTTGTCT
TCCCCTGCTT CATCTCCCGC AGTACAGAAA ATTCAGAGCA CTGACGCTCA AGCTTCTCCC
CATCCTACGC AGGAAGCCGA ACCACAACAG GAAACTCTTA CACCCGCTGC CCCCCCCACC
TCTCTTGCCG TTGCAGAGGA AGAATTTCCC TACTCCGCCA CTAAATTGCG GACAAAAACC
GTACCTGCCT CCGAAGAAAT CACCCGGCAT CCAGACTCCG ATGCCTCCGA TGTGTCGAAA
TTTCCTACGG ATTCTCCAGA GCCTACTTTT ATGGATCCAG AGGAAAATCT TCCTCTGGAA
AGACGAACTA ACAGTTTCTT TGACAATCTA TTCGATACTC CAAGCACATC ATCCCAAACC
CAGGCACCCG TAGAAAAAGA GGAACCGGCA GTTCTGTCCC AACAATCAGG AAGAACAATC
ACGGAAGAAG ACTGGAAAAC GGTGTTGGAA CAAATGTCCG CCAAATTCCC TCTTCAAGCG
GACTTTCTAG CCAACAGCGT TTTTTCCGGT TATGATGGTG TAGCAGTCGC CATTTCTTTT
CATCCTTCTG ACCGTCAGGG GATGGACAGT CTTGGAACCG GCCCTCTGCG AACAGCTTTG
GAAGCTGCTC TTTCCCAATA TATTGGAACC TCTGTTACTA TTTCTATCCG TCAGGATTTC
TCCATTCCCG AACCCGTGCA GGAAGAACTG GCTCCTCTGC CTGCACCACC TCCTTCCGCA
TCCACCATTC CTGCACCTAA ACCTCATACC CCGCAGAAAA AAACCGCAGA GCCTGTCCAG
GAAGCTTCCA AAGAGGAAAA TGAAGATAAC TCTTACTACA CGGATCCGCT GATTGATGCT
GCTATGGAGA TTTTCCGGGC TCGTATCATT TCCCAATAG
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| Protein sequence | MSYQVFARKY RPLTFDDVLG QDHVVRTLKN AIEHNRLAHA YLFVGPRGTG KTSTARIFAK
ALNCSGGPKV DFDPHEDICE EIAEGRSLDV LEIDGASNRG IDHIRDLRDN VRFAPSRGNF
RIVYIDEVHM LTKESFNALL KTLEEPPPHV KFIFATTEPH KILPTILSRC QRFDLRPIPS
EIIAEHLLHI ASAEGVSLSR EAAFAVAKVA DGGMRDAQSM LDQLVSFCGD HIEEQQVLHI
FGITSRETVA HALALILNKE LPSLLHLLHE QAEAGRDMSQ FLSEIISAVR EILVSKVDPE
ASFDSLPESS KEELAELVKR THTDKILRLV EVLAETEDKM RWSTNKRLHL EMGLIKAVHT
LAEASISDII MALEGAPLAT AAPASSSDLA SQQEPSTFIS SATAPTPAPR QNIQSPVAAT
NPTPATEEHL MDPIPDFSLS SPASSPAVQK IQSTDAQASP HPTQEAEPQQ ETLTPAAPPT
SLAVAEEEFP YSATKLRTKT VPASEEITRH PDSDASDVSK FPTDSPEPTF MDPEENLPLE
RRTNSFFDNL FDTPSTSSQT QAPVEKEEPA VLSQQSGRTI TEEDWKTVLE QMSAKFPLQA
DFLANSVFSG YDGVAVAISF HPSDRQGMDS LGTGPLRTAL EAALSQYIGT SVTISIRQDF
SIPEPVQEEL APLPAPPPSA STIPAPKPHT PQKKTAEPVQ EASKEENEDN SYYTDPLIDA
AMEIFRARII SQ
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