| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1222 |
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| Symbol | |
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| ID | 6275585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1468707 |
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| End bp | 1470575 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613278 |
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| Product | oligopeptide transporter, OPT superfamily |
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| Protein accession | YP_001877828 |
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| Protein GI | 187735716 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.107355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTA CGTCCCCCCA ATCTTCCAGC CCTCTCCCCT CCTGCTTGGA AAAACCGCTG
CCTCTGGATG GATTCCAAGG TACTCCGGAT GAAGTAGAAC AGCAATGGTA CGATCAAGTT
TATCTGGGTT CCGGAGACAG AATGAAGCAG CTTACCTGGA GAGCCGTCAT CGTAGGCATG
CTTCTAGGCT CCATCCTTTC CCTCACTAAT CTGTACGCCA ACCTCAAAAT GGGATGGTCC
TTTGGGGTGG CTCTGACGGC AGGAATTATC TCTTTTGCCC TCTGGAACGC CTTTGTGCGC
CTGGGCATTT CCAAATCCCC CATGACTATT CTGGAAAATA CATGCATGCA GTCCGCTGCC
AGTTCTGCAG GCTATTCTAC AGGGGGAACC CTCACCTCTG CCGTAGCCGC CCTGCTCCTG
CTGACAGGAC AGCACATGCC TCTTGGCACT ACCTTCGCCT GGATATTTTT CATTGCCGTA
CTGGGTGTCA CCATGGCCAT TCCGATGAAA CGCCAGATGA TCAACATTGA ACAAATAAGG
TTCCCAGACA GTATTGCTAC GGCGGAAACC CTCAAAGTTC TCTATTCTGA AGGCAAAAAG
GCGGCGGGAC AGGCCAAAGC CCTTCTTTAT TCTGCCCTTT TCGCCGCCGC TAATGCCATC
GCCATGGCTG CAGGAGGAGA ACGATGGCTT GGAACGGTCC AGCAACATAT CCTCGGCAAC
TGGTACCAGC GTACTATCTT CTTCAAATGG GATCTCATGT TCGTGGGTGC GGGAGCTCTG
GTAGGCATGA AAACATCCCT CAGCCTCTTC ATCGGAGGAA CCGTTTGCTG GGCTCTTTAC
GTTCCGTGGC TGGAAAGCCA GAAATTGCTT CCCGCGGGAG CAGGTTATCG GGAGAGCGTA
AGCTGGACCC TGTGGGGAGG AACCGCCTGC ATGGTCGTCG CCAGCATTGT GGCTTTCCTA
TTCCAATGGA AAAGCATTGT TCGTTCCTTT TCTTCCCTGG GTGCCATGTT TTCCCTGAGT
AAAAAACGAA AACTGACAGA TGTGGAAAAA ATAGAAACGC CCATGAGCTG GTTTCTAACA
GGCCAGCTTA TCTCTCTGGG AGCTCTCGGC TATCTGGCTC ATACATCATT TAACGTTCCG
TACTGGATGA GCTGCATCGC GGTAGTCATA TCCTTTTTCC TGGCGCTGGT CGTCTGCCGA
ATCACCGGAG AAGCCAATAT TACACCCACC GGAGCCATGG GAAAAGTTAC ACAGCTCATC
TTCGGAGGGA TTGCACCCGG GCACGTAACA GCCAACCTGA TGGCGGCCAA TATCACTTCA
GGAGCGTCCA GTTCCTCGGC AGACCTGCTC GTAGACCTCA AAGTAGGCTA CCTGCTGGGA
GCTAACCCCC GCAAACAATT CATCGCCCAG TTTTCCGGAA TTTTTCTGGG AACCCTCGTC
TCCGTGCTGG CCTTCCGCTC CATGGTTCCG GATGCGAACG CTCTCCAGGC TTTCAATGCT
CCGGGAGCCA GAACATGGGC GGCCACAGCG GAAGCACTGG GCATGGGGTT CAGCCATTTG
CACAGCATCA AGGTGCTTTC CATCATTGCA GGCGGTATTC TCGGACTCAT TCTGGTGCTT
ATTCCCCGCT ATATTCCCCG GACAGGAAAA TGGCTCCCCA CCCCCATCGG CTTCGGCCTG
GCCTGGGCCA TCCAGTGGAA CGACTCCTTC CTTTTCTTTA CAGGAGCTGT GCTCGGCTGG
GCTGCGGACC ATCTTTTCAA GGCCAAATCA CGAGAATATA AAGTCCCCAC CGCCTCCGGC
ATCATTGCAG GCGCAGCCCT CACGGGAATG GCCATTCTGA TGTTCAGCAT TTACCAGGCA
GCCCTCTGA
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| Protein sequence | MASTSPQSSS PLPSCLEKPL PLDGFQGTPD EVEQQWYDQV YLGSGDRMKQ LTWRAVIVGM
LLGSILSLTN LYANLKMGWS FGVALTAGII SFALWNAFVR LGISKSPMTI LENTCMQSAA
SSAGYSTGGT LTSAVAALLL LTGQHMPLGT TFAWIFFIAV LGVTMAIPMK RQMINIEQIR
FPDSIATAET LKVLYSEGKK AAGQAKALLY SALFAAANAI AMAAGGERWL GTVQQHILGN
WYQRTIFFKW DLMFVGAGAL VGMKTSLSLF IGGTVCWALY VPWLESQKLL PAGAGYRESV
SWTLWGGTAC MVVASIVAFL FQWKSIVRSF SSLGAMFSLS KKRKLTDVEK IETPMSWFLT
GQLISLGALG YLAHTSFNVP YWMSCIAVVI SFFLALVVCR ITGEANITPT GAMGKVTQLI
FGGIAPGHVT ANLMAANITS GASSSSADLL VDLKVGYLLG ANPRKQFIAQ FSGIFLGTLV
SVLAFRSMVP DANALQAFNA PGARTWAATA EALGMGFSHL HSIKVLSIIA GGILGLILVL
IPRYIPRTGK WLPTPIGFGL AWAIQWNDSF LFFTGAVLGW AADHLFKAKS REYKVPTASG
IIAGAALTGM AILMFSIYQA AL
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