| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1220 |
|---|
| Symbol | |
|---|
| ID | 6273768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1465151 |
|---|
| End bp | 1467709 |
|---|
| Gene Length | 2559 bp |
|---|
| Protein Length | 852 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642613276 |
|---|
| Product | Alpha-N-acetylglucosaminidase |
|---|
| Protein accession | YP_001877826 |
|---|
| Protein GI | 187735714 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.257398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTC ATGCTTTTGC CGCCGGGGCG CTTCTTGGAA CTGCCATTTC TCCGCTTGTT
TGTGTATCTG CCGCAGAAAG ATCGCCTGTG GCGGCGGCTG AAGATGTAGT GGCGCGTGTA
ACTCCCTCGG CAAAGGGTTC TGTCTTGTTC CACTTAAATC CGGATCAGGG CAACAAGATC
ACTATTTCCG GTATTGCCGG AGGTATCCGG GTGGAGGCGT CAGATGTACG CCGCTTGGTG
GCGGGTTATG GATGGTATTT AAAGAATATA GCCAAGGTCC ATTTTTCGTG GAACGGAAAT
CGGATAACGC TTCCTTCCCC TTTGCCGGTT CCCGCCAGTC CGGTTACGGT AGAAAGCCCG
TGGAATATCG TTTTTGCCTA TAATTACTGC ACCCTTTCTT ATACGGCGGC TTTTTGGGAT
TGGAACAGAT GGCAGCGGGA GATTGATTTT CTGGCGTTGA ATGGGTTTAC GCATGCGCTG
GTAACGGCGG GTTTGGAAAA GACATGGGAA GATTTTCTGA CAGGCTTGGG GTATCCCCGG
GAAAAAGCTC TTCGTTTTAT CCCTAATCCG GCATTTGCCG CGTGGTGGAA TATGGGAAAT
CTGGAAGGCC ACGGTGGTCC GCTGAGCCAG CAACAGATAA ATAAAATGGC CCAGATGGGA
AGGCGCATTG TCTCCCGTAT GGAACAGTTG GGGATGACAC CTGTACTTCA GGGATATGTG
GGATTTGTTC CTTCTGACTT TCAGGAAAAT GTCCGGATAG ACGGATTGAA GCTTATTCCT
CAGGGGGAAT GGGTTAATTT CAGGAGGCCG TGGGTGGTGG ATCCCACTTG TGAGGCTTTT
CCCAAACTGG CCGCAGACTG GTACAAGGCT CTCCGCAAGG TATACGGCAT TCCCGGAAAG
ATGTTTGGCG GGGATTTGTT TCATGAGGGG GGGCGGAAGG GGGATATTGA CGTAACGCAG
GCGGCACAGG AAGTGCAGAA AGCCATGCAA AAGGCTTCTC CGGGGGCTTT CTGGGTGATT
CAGGCCTGGG GTGGAAATCC TACCCGAGAG TTGTTGTCCG GGTTGGATCC GGAGCGTGCG
CTTGTATTGC AGCTTACCAA GGATATGGCT AACGGGGGAA AGAATTTAAG GACTTTTAAT
GGTATTCCGT GGGTCTGGTG CGAACTGGCG AACTTTGGAG GCAATACGGG AATGTACGGG
GGGGTTCCCC TTCTGTCCCG GCTTGGAAGT GAGTTGTCCG GCTATAAGGA TAAGGGGCTG
GTGGGCATGG GAACTTTGTC CGAAGGGCTT GAGACGAACC CCCTGCATTA CGCCCTGTTC
AGCGACCGTT TGTGGACTAG GGAGGATATT TCTGTCCGGG AGTGGCTTGG AAAGTACGCG
CGCCAGCGTT ACGGTTTCGC ACCAAAGGCT GTCGTGAAGG CGTTGGAAGT TCTGTCTTTC
TCCATCTATA ACCCCGTTCG TTCTCAGGAA GGGTGTACGG AGTCTATTAT TTGCGCCCGC
CCGTCCTGGA ATGTTCGAAA GGCATCCACA TGGTCCAGCG GGGAGCGATA TTATCACCTG
GGCGATATTG TAAAGGCGGC GCGCGGTTAT CTGAAGGCCG CGAATGATCA GCCGAATTTG
GTGAAAAAGG AGACGTTTCG TTATGATTTG GTGGATGTTG TGCGTCAGGC TCTTGCGGAC
GCTGCTTTTT ACCAGCTTCA ACAGGTCAGG AGTGCTTTTG ATTCCGGAGA TTTGGCTGCG
TACAGGAAGC AGGTAAAGCG TTTCCTGTCT CTGATTTCAG ATATGGATGC CCTTTTGGCG
ACGGATAGCC AGTTCCTATT AGGAACTTGG CAGAAAAGGG CTTTGGATTG GGGTGATTCC
CGGCAGGAAA AAGCCTTGAT GGACAAGTCT GCGAAGATGC TTATCACTAC GTGGATTGAT
CAGGTTCCCC GGTCTCTGAA TGATTATTCC AATCGTCAGT GGGCCGGGCT TGTTTCCGAT
TTTTATTTGC CTCGGTGGAA GAATTTTTTT GAATTTCAGA TGGATGTCCT GACCGGAAAG
AAGACGCGTG ATGCCGCCCA TGCCGCATTT ATGGATAAGA TGGTTCGGGA TGAACTGGCC
TTTGCCGGAA ATGGGAAAAT ATATTCTGTC AAACCAGCGG GGGATACTTT GGCCGTTGCT
AATCGTGTGA TGAATACCCA CCGGGAAATG TTGGACGCCC TGAGTGCGGA AGAAAAGCAT
TCCTCGGGCA GTCCATGGGA ACTCCAGCAA GGTTCTCCGT TGCAGTTTGA TGTGACGGAT
CAGGTGACTG CTTCTGGCAC ATATACTGCT ACTTTCCAGT GGAAGAATGG CCCCAGCGCC
TTGAAAATCC ATTCTGTCAG ATTATACGAG GGTAACAGGG AGGTGGCTTC CGATGTTCAT
GAGGGCAGAA CTGGCGTGGA AAATAAGGAT AATATTTACA GACTGGAATT GAAGAAGTAC
AGAACCAACC TTGATTCCTA TATCCTGAAG GCAGAAGTAA GCGGTGTTTC TCAGGGCGCT
TCCAAAGGAG AAATGGTGTT GAAAAAACTG GTGGATTGA
|
|---|
| Protein sequence | MFSHAFAAGA LLGTAISPLV CVSAAERSPV AAAEDVVARV TPSAKGSVLF HLNPDQGNKI
TISGIAGGIR VEASDVRRLV AGYGWYLKNI AKVHFSWNGN RITLPSPLPV PASPVTVESP
WNIVFAYNYC TLSYTAAFWD WNRWQREIDF LALNGFTHAL VTAGLEKTWE DFLTGLGYPR
EKALRFIPNP AFAAWWNMGN LEGHGGPLSQ QQINKMAQMG RRIVSRMEQL GMTPVLQGYV
GFVPSDFQEN VRIDGLKLIP QGEWVNFRRP WVVDPTCEAF PKLAADWYKA LRKVYGIPGK
MFGGDLFHEG GRKGDIDVTQ AAQEVQKAMQ KASPGAFWVI QAWGGNPTRE LLSGLDPERA
LVLQLTKDMA NGGKNLRTFN GIPWVWCELA NFGGNTGMYG GVPLLSRLGS ELSGYKDKGL
VGMGTLSEGL ETNPLHYALF SDRLWTREDI SVREWLGKYA RQRYGFAPKA VVKALEVLSF
SIYNPVRSQE GCTESIICAR PSWNVRKAST WSSGERYYHL GDIVKAARGY LKAANDQPNL
VKKETFRYDL VDVVRQALAD AAFYQLQQVR SAFDSGDLAA YRKQVKRFLS LISDMDALLA
TDSQFLLGTW QKRALDWGDS RQEKALMDKS AKMLITTWID QVPRSLNDYS NRQWAGLVSD
FYLPRWKNFF EFQMDVLTGK KTRDAAHAAF MDKMVRDELA FAGNGKIYSV KPAGDTLAVA
NRVMNTHREM LDALSAEEKH SSGSPWELQQ GSPLQFDVTD QVTASGTYTA TFQWKNGPSA
LKIHSVRLYE GNREVASDVH EGRTGVENKD NIYRLELKKY RTNLDSYILK AEVSGVSQGA
SKGEMVLKKL VD
|
|---|
| |