Gene Amuc_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1208 
Symbol 
ID6273748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1444021 
End bp1444407 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content63% 
IMG OID642613259 
Productholo-acyl-carrier-protein synthase 
Protein accessionYP_001877814 
Protein GI187735702 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA TTGCAGGATT GGGAATGGAT TTGGCGGATA TGGAACGCGT ACGCCAGGCC 
CTGCGGAAAA ACGGGGAGGC GTTTGCGTTG CGCATCTGCA CCCCTGATGA GTGGGCTTAT
TGCCGGAAGC ACGCGGATCC CGTGCCGCAT CTGGCGGCGC GCTTTGCGGC CAAGGAGGCC
GTGGCGAAAG CCCTGGGAAC GGGAATCGGG GCGAAGTGCG CTTTTACGGA TGTGGAGGTG
GTGCGCGGCG ATGCGGGAGT TCCTTCCATT CTTTTGCACG GGGCTGCGGG AGTGACCGCC
CGGGAGCTGG GCATTACGGG CTGGTTCCTG ACCATGACCC ATTCCAGGTT GAGCGCCGCC
GCCACCGTTA TTGCCTTGGC GCAATAA
 
Protein sequence
MSRIAGLGMD LADMERVRQA LRKNGEAFAL RICTPDEWAY CRKHADPVPH LAARFAAKEA 
VAKALGTGIG AKCAFTDVEV VRGDAGVPSI LLHGAAGVTA RELGITGWFL TMTHSRLSAA
ATVIALAQ