Gene Amuc_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1199 
Symbol 
ID6273842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1435967 
End bp1436779 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content60% 
IMG OID642613250 
Productcobalt ABC transporter, inner membrane subunit CbiQ 
Protein accessionYP_001877805 
Protein GI187735693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00978481 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGT TTACGGACGC CTCGCAGCAA TTCCGCCAGA TGGATCGGTT TTCCTGCGGA 
AATACCGGCA TCCACCGTCT GGACGCCCGC ATTAAAATCG GAGCTTTCCT CGTCTATCAA
ATCTGCGTTC TTTCCTGGCC TCCGCAGGAA ATTACGGGAC TCCTGCCTTT CTTCCTGTTC
CCGGTCTGTG TCATCCGCCT GGCGGGCCTT CCCCTGGGCT ACCTTCTGAA ACGTACCCTG
TGGCTGCTGC CCGTCGCCGT CATGATAGGC CTCTTCAACC CTCTGGTGGA CAGAACTCCC
ATGGGAGAAT GGTTCGGCAT TCCCGTCACG CAGGGCATGA TCTCCTTCAT CTCCATCATC
CTGAGGTGCA TGCTCACCAT CCTGGGCGCC TTCACGCTGT TGGCCTCCAC AGGCTTTGCG
CCTCTCTGCC GCGGCCTGAG GCAGCTCGGC GCTCCGCGCA TTCTAATCAC GCTGATGACC
TTCCTGTACC GGTACGCCTT TATCCTGGTG GATGAATGCC AACATATGCT GATGGCATTC
CGCTCCCGGC GGGGAGGCTC CGGGCCCATC CCTCTTTCCA CGTGGGGGGC CATGGCCGGA
CAACTTCTGC TGCGGGCATT CGGGCGGGCG GAACGCATTT ACCAGGCCGT CCTGTGCAGA
GGCGGGGAAG ATCCTGAATT CGTCAATTCC CGCAGCGTCA TCACTGGCCG TGGCGCAGCG
GGAGGCCTTC TTTTCTGCAT TCTCGTCATT CTGTTCCGCT GTTTCAACAT CACCATGCTC
GCGGGCCAGT ACGCCCGCAG CCTCATCCCA TGA
 
Protein sequence
MPLFTDASQQ FRQMDRFSCG NTGIHRLDAR IKIGAFLVYQ ICVLSWPPQE ITGLLPFFLF 
PVCVIRLAGL PLGYLLKRTL WLLPVAVMIG LFNPLVDRTP MGEWFGIPVT QGMISFISII
LRCMLTILGA FTLLASTGFA PLCRGLRQLG APRILITLMT FLYRYAFILV DECQHMLMAF
RSRRGGSGPI PLSTWGAMAG QLLLRAFGRA ERIYQAVLCR GGEDPEFVNS RSVITGRGAA
GGLLFCILVI LFRCFNITML AGQYARSLIP