Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1199 |
Symbol | |
ID | 6273842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1435967 |
End bp | 1436779 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642613250 |
Product | cobalt ABC transporter, inner membrane subunit CbiQ |
Protein accession | YP_001877805 |
Protein GI | 187735693 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00978481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTGT TTACGGACGC CTCGCAGCAA TTCCGCCAGA TGGATCGGTT TTCCTGCGGA AATACCGGCA TCCACCGTCT GGACGCCCGC ATTAAAATCG GAGCTTTCCT CGTCTATCAA ATCTGCGTTC TTTCCTGGCC TCCGCAGGAA ATTACGGGAC TCCTGCCTTT CTTCCTGTTC CCGGTCTGTG TCATCCGCCT GGCGGGCCTT CCCCTGGGCT ACCTTCTGAA ACGTACCCTG TGGCTGCTGC CCGTCGCCGT CATGATAGGC CTCTTCAACC CTCTGGTGGA CAGAACTCCC ATGGGAGAAT GGTTCGGCAT TCCCGTCACG CAGGGCATGA TCTCCTTCAT CTCCATCATC CTGAGGTGCA TGCTCACCAT CCTGGGCGCC TTCACGCTGT TGGCCTCCAC AGGCTTTGCG CCTCTCTGCC GCGGCCTGAG GCAGCTCGGC GCTCCGCGCA TTCTAATCAC GCTGATGACC TTCCTGTACC GGTACGCCTT TATCCTGGTG GATGAATGCC AACATATGCT GATGGCATTC CGCTCCCGGC GGGGAGGCTC CGGGCCCATC CCTCTTTCCA CGTGGGGGGC CATGGCCGGA CAACTTCTGC TGCGGGCATT CGGGCGGGCG GAACGCATTT ACCAGGCCGT CCTGTGCAGA GGCGGGGAAG ATCCTGAATT CGTCAATTCC CGCAGCGTCA TCACTGGCCG TGGCGCAGCG GGAGGCCTTC TTTTCTGCAT TCTCGTCATT CTGTTCCGCT GTTTCAACAT CACCATGCTC GCGGGCCAGT ACGCCCGCAG CCTCATCCCA TGA
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Protein sequence | MPLFTDASQQ FRQMDRFSCG NTGIHRLDAR IKIGAFLVYQ ICVLSWPPQE ITGLLPFFLF PVCVIRLAGL PLGYLLKRTL WLLPVAVMIG LFNPLVDRTP MGEWFGIPVT QGMISFISII LRCMLTILGA FTLLASTGFA PLCRGLRQLG APRILITLMT FLYRYAFILV DECQHMLMAF RSRRGGSGPI PLSTWGAMAG QLLLRAFGRA ERIYQAVLCR GGEDPEFVNS RSVITGRGAA GGLLFCILVI LFRCFNITML AGQYARSLIP
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