| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1189 |
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| Symbol | rpmB |
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| ID | 6273831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1425427 |
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| End bp | 1425690 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642613240 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_001877795 |
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| Protein GI | 187735683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000438944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGAA TTTGCATCAT CAGAGGTACC ATGCCTCACA AAGGTCGTCG TATCCATCGC
TCCGGTCTTG CCAAGAAAAA GGGCGGTATT GGTCGTCACG TCACTAAGAC TGTCAATCGT
ACCGTTTTCC CCAACCTTCA GGAGAAGCGC ATCTGGGTTC CTGAACTCGG TCAATTCGTG
AAAATGAAGA TTTCCGCCAA GGCCCTGCGT ACGATCAACA AGAACGGTGC TTACAACACT
CTTAAAAAAG TAGGTCTCCT GTAA
|
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| Protein sequence | MSRICIIRGT MPHKGRRIHR SGLAKKKGGI GRHVTKTVNR TVFPNLQEKR IWVPELGQFV
KMKISAKALR TINKNGAYNT LKKVGLL
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