Gene Amuc_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1168 
Symbol 
ID6273796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1402799 
End bp1403806 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID642613219 
ProductABC transporter related 
Protein accessionYP_001877774 
Protein GI187735662 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC CCCTACTGCT GGAAGTTTCC GGACTGTCCA AATCATTCGG TCCGCTGAAA 
GCCGTCAACA ATGCCTCCTT CGTCATCCGC CAGGGCCAGG TCGTCGGCCT GATTGGCTCC
AACGGAGCCG GCAAAACCAC CCTCATGCGC ATGCTGGCCA CGCTGGAAAT GCCTGACTCC
GGCCACATCA GGCTCAACGG GGCCGATGTT GTGGATCATC CCGAACTGGC ACGTTCCCGC
ATCGGATGGA TGCCGGACTA TTTCCACCCC TATAAAAACA CCAGCGTCCG GGAATATCTG
GATTTTTTCG CCAGGGCCTG CGGCATGGGC AGGGAACGTT TACTGGACGC TGTGGACGAA
GTGATGGACT TCACGGAACT GGCCGGCCTC CAGAACCAGA TGATCGATAA ACTTTCAAAA
GGGCAGACGC AGCGGCTCTG CCTGGCGCGT ACGCTGATCA GCGACGCGCA ATTCCTCATT
CTGGACGAAC CGGCGGCAGG ATTGGACCCC AAAGCGCGCC TTGAATTCAA AAATCTGGTG
CATCTGCTCA AAGCGCGTGG AAAAACGCTG CTCATCAGCT CCCATATTCT CTCGGAACTG
GGGGAAATGT GCGACGCCCT CATCTTCATG AATGCAGGAA CCGTCATCCA TGACGGCAAT
ATGGAAGACC TGCTGCACCG CCAGACGGAA TCCGGATACG CCTTTGAAAT CCGCACCGCC
GGAGACGACA CCGCCTCACT GGAGGAATGG CTGGCCCTCC GCCGGGGATG GAAAGTGCGC
CATGTACAGC AACAGAAAGT AGTGGCCGCC TTCGTCTCCT GCGAACCGGA AGCTGTGGCT
GCGGAACTCC GCCAGCTCTG CCTCGACCTC CCCGTAATTG ATTTCCACCG TAGCGAACGC
CGTCTGGAAG AAGCTTTTGT GGACATCCTT ATCCACGGCA GCGGGGAACC GGCCCCGCGG
CAGAATCCCG CCTCTTCCCA GGAAACCCCA TCCATCCCCG CCTCATGA
 
Protein sequence
MSTPLLLEVS GLSKSFGPLK AVNNASFVIR QGQVVGLIGS NGAGKTTLMR MLATLEMPDS 
GHIRLNGADV VDHPELARSR IGWMPDYFHP YKNTSVREYL DFFARACGMG RERLLDAVDE
VMDFTELAGL QNQMIDKLSK GQTQRLCLAR TLISDAQFLI LDEPAAGLDP KARLEFKNLV
HLLKARGKTL LISSHILSEL GEMCDALIFM NAGTVIHDGN MEDLLHRQTE SGYAFEIRTA
GDDTASLEEW LALRRGWKVR HVQQQKVVAA FVSCEPEAVA AELRQLCLDL PVIDFHRSER
RLEEAFVDIL IHGSGEPAPR QNPASSQETP SIPAS