Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1168 |
Symbol | |
ID | 6273796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1402799 |
End bp | 1403806 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642613219 |
Product | ABC transporter related |
Protein accession | YP_001877774 |
Protein GI | 187735662 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGC CCCTACTGCT GGAAGTTTCC GGACTGTCCA AATCATTCGG TCCGCTGAAA GCCGTCAACA ATGCCTCCTT CGTCATCCGC CAGGGCCAGG TCGTCGGCCT GATTGGCTCC AACGGAGCCG GCAAAACCAC CCTCATGCGC ATGCTGGCCA CGCTGGAAAT GCCTGACTCC GGCCACATCA GGCTCAACGG GGCCGATGTT GTGGATCATC CCGAACTGGC ACGTTCCCGC ATCGGATGGA TGCCGGACTA TTTCCACCCC TATAAAAACA CCAGCGTCCG GGAATATCTG GATTTTTTCG CCAGGGCCTG CGGCATGGGC AGGGAACGTT TACTGGACGC TGTGGACGAA GTGATGGACT TCACGGAACT GGCCGGCCTC CAGAACCAGA TGATCGATAA ACTTTCAAAA GGGCAGACGC AGCGGCTCTG CCTGGCGCGT ACGCTGATCA GCGACGCGCA ATTCCTCATT CTGGACGAAC CGGCGGCAGG ATTGGACCCC AAAGCGCGCC TTGAATTCAA AAATCTGGTG CATCTGCTCA AAGCGCGTGG AAAAACGCTG CTCATCAGCT CCCATATTCT CTCGGAACTG GGGGAAATGT GCGACGCCCT CATCTTCATG AATGCAGGAA CCGTCATCCA TGACGGCAAT ATGGAAGACC TGCTGCACCG CCAGACGGAA TCCGGATACG CCTTTGAAAT CCGCACCGCC GGAGACGACA CCGCCTCACT GGAGGAATGG CTGGCCCTCC GCCGGGGATG GAAAGTGCGC CATGTACAGC AACAGAAAGT AGTGGCCGCC TTCGTCTCCT GCGAACCGGA AGCTGTGGCT GCGGAACTCC GCCAGCTCTG CCTCGACCTC CCCGTAATTG ATTTCCACCG TAGCGAACGC CGTCTGGAAG AAGCTTTTGT GGACATCCTT ATCCACGGCA GCGGGGAACC GGCCCCGCGG CAGAATCCCG CCTCTTCCCA GGAAACCCCA TCCATCCCCG CCTCATGA
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Protein sequence | MSTPLLLEVS GLSKSFGPLK AVNNASFVIR QGQVVGLIGS NGAGKTTLMR MLATLEMPDS GHIRLNGADV VDHPELARSR IGWMPDYFHP YKNTSVREYL DFFARACGMG RERLLDAVDE VMDFTELAGL QNQMIDKLSK GQTQRLCLAR TLISDAQFLI LDEPAAGLDP KARLEFKNLV HLLKARGKTL LISSHILSEL GEMCDALIFM NAGTVIHDGN MEDLLHRQTE SGYAFEIRTA GDDTASLEEW LALRRGWKVR HVQQQKVVAA FVSCEPEAVA AELRQLCLDL PVIDFHRSER RLEEAFVDIL IHGSGEPAPR QNPASSQETP SIPAS
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