| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1165 |
|---|
| Symbol | |
|---|
| ID | 6273804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1398694 |
|---|
| End bp | 1400421 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642613216 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001877771 |
|---|
| Protein GI | 187735659 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.684145 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCCCC ACTTCACCAA CACGACCGCG TTCTGGGCGC TTCTGGCCAT CCCCCTCATC
ACCGCCATCC ATTTCCTCCA GCACAAAACA AAAACACAGG CCACGGCCAC GCTCTTCCTG
TTGGAAGCTC TGGCTCCGGA GGCCCATGAG GGTAATGCCT GGGACAGGTT ACGCATATCA
CGCTCCTTCT GGATGCAAAT TCTGGCCGTC CTCCTGCTTA CCTGGGTTCT GGCCGCTCCT
GTCTGGCCCG GCAAAGGCTC CGGCCAGACC GTAGTCTTCA TTCTGGATGA TTCCGCAAAT
ATGGCCCCCT TTCGTCAAGA AGCCGTGAAT GCCGTCTCCG AAGACATGGA CACCATCCTC
CGGTGCGGAA TCCCGGTCAC ATGGGTTCTC ATGGGCAGCA GGGCTTCCGG ACAGCCGCTC
TACCGGGGGC CGTCCGTCCG CCAGGCCCTG CGCGCCCTGG ATCTCTGGCA GCCGCGCGAA
GGAACACATG ACCTGGCCCC TGCCCTGCGC ACCGCCACAG CCGTTGCCGG GCCAACGGGA
ATCACGCGCC TGATTACATC CACTGCCCGG AGGGTTCCCG CCGGCCAATC CGCACGGGGT
GTAGGGAAAC CTCTGGAAAA TGCGGGTTTT GCGGGAATAA CCCCGGTGGA GGCCGCCGGC
CCCGGCCATT GGAGGATTGC CGTTAAAAAC AATAGCCCAT CCCCTCTTCG GAGCGAAATC
TCCATCCATA CGGAAAGCGG GCGTCCTCCT GCCCGGCGTT CCCTGTTCCT GAATCCAGGA
ACTGTCACGG AATTTGAATA CAGCCTCCCT CCTGAAAGCG GAAAGGCCGT GCTCCGGCTC
CCGACGGACG CCTTCCCGGC GGACAATGAG CTCCTGCTGG TCCGCTCCGC TCCCGCCCCC
GTCGCCGTCA GCATGGAAAT TCCAGAAAAA TCCGGAAAAA TCTTCCGCAA TATCATCAAT
AGCCTGCCGG GATTCTCCCC CGTCCCGGAC GGCTCAGATC CCGACCTCCT CCTGCTGGAG
GGAAAAACGG AAAATGCCAG TCCCCCCGGA AAAGCGGCCA TCATATTTGC AGCCAGCGGC
AAACCATCTT ACGGCGCTGT CACGGCGGAA CGGCATCCGC TGACTGACGG GCTGAACTGG
AGCGGCCTGC TCATCCCCTC CATCGGTTCC ATGAAGCCGG GGGAAAAAGC CGGAGTCCTG
CTCTGGCAGG GGGAATCCCC CCTGGCCTGG GTGGACGGGA AACGCCTTTT CCTCAACTGG
CCCTGGGAAA AATCCAATGC GGACCGCGTT CCGGCGCCCT TGCTCATGAC CCGCAGATTC
ATGCAATCCG TACAGGAGAA TCTGCCCGGA ACACATTACG GCAACCTTCC CGGAGGAACT
CTCTTATCCA TGCCCGCAGG CGGAAAACTC ATTCAAACCA TGCCCGGGGG AGAACGCCGT
GAAACTGTCT TTAACGGCAG GCTCCCGGAA GAAACCGGAT ATGTGGAAAT CTTCCCCCCC
GGAGAAGGGA AAACACCCCT GTTCCAAGGC TCCGTCTGGT TCTCCGACGC CCGGATGGGA
GATTTTTCCC ACTGCTCCAC GTTTGACACA GGACTTCCCC AGCCCCATGA AGAGGCGCTC
CGGCACATGA AACGTGACCC TCTGGCCCCC CTCTGGCTGG CGCTGGCGTT CCTGGCCCTG
ATTCTTTCCT GGCTTCCTCC CGTCCCAGAC ATCTCCCTGC GCCCATGA
|
|---|
| Protein sequence | MLPHFTNTTA FWALLAIPLI TAIHFLQHKT KTQATATLFL LEALAPEAHE GNAWDRLRIS
RSFWMQILAV LLLTWVLAAP VWPGKGSGQT VVFILDDSAN MAPFRQEAVN AVSEDMDTIL
RCGIPVTWVL MGSRASGQPL YRGPSVRQAL RALDLWQPRE GTHDLAPALR TATAVAGPTG
ITRLITSTAR RVPAGQSARG VGKPLENAGF AGITPVEAAG PGHWRIAVKN NSPSPLRSEI
SIHTESGRPP ARRSLFLNPG TVTEFEYSLP PESGKAVLRL PTDAFPADNE LLLVRSAPAP
VAVSMEIPEK SGKIFRNIIN SLPGFSPVPD GSDPDLLLLE GKTENASPPG KAAIIFAASG
KPSYGAVTAE RHPLTDGLNW SGLLIPSIGS MKPGEKAGVL LWQGESPLAW VDGKRLFLNW
PWEKSNADRV PAPLLMTRRF MQSVQENLPG THYGNLPGGT LLSMPAGGKL IQTMPGGERR
ETVFNGRLPE ETGYVEIFPP GEGKTPLFQG SVWFSDARMG DFSHCSTFDT GLPQPHEEAL
RHMKRDPLAP LWLALAFLAL ILSWLPPVPD ISLRP
|
|---|
| |