Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1155 |
Symbol | |
ID | 6273868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1386032 |
End bp | 1387018 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642613206 |
Product | protein of unknown function DUF323 |
Protein accession | YP_001877761 |
Protein GI | 187735649 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.0094568 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATCA ATTTGCAAAA AGTCATTATA GCCGTATGTG CGGCCGCAAC GGTCAGTGCG GGATTCGCAG CCCGCACCGA GGGGGCCAAA CTGCACCGAT TCAGCACTAC TATCGAAAAA GAGAGGCCGC AGTTGAATGA AGAAACGAAA CGGTTGATTG CTTCCTATCG CCGGGACCCG TCCGAGGCTA ATCGGTCGGC TTTGAGGAAA CAGGTCGGGA TTAATTACGA CAAGGTCCTT GACCGAAAAA AGGCGAAGCT TGAAGAATTG AAACGAACGG CCCGGCATGC GTCCAAGATA CAGGAAATGC AGGAGATCGT GGATGAAATG GTTCAAAACA GGGAAGCGCG CATCGACCAA AGCATGCGGC GTTTCAGTGA TCCGCGATTC AGACCAGGTG CCCGCTATGC AGATGGCGGG TATTTGCCGG TGCTCGGAGC TTCCTGGAAT GTATCAATTG CATATACTCC GGTTACCAAT GAGGATTATG CCCAATTCCT GAAGGCAACG GGAAGGAAGG CTCCTAAGGA TTGGGATAAT GGCGCCATGC CTGCCGGCAA AGGGAGGCAT CCCGTGGTGA ATGTTTCCTA TGACGACGCT TCTGCCTATT GCCAATGGTT GTCGCTCCAG GATAGGAAAG CCGTTTATCG CCTGCCGACT GAAGAGGAGT GGGAGTTTGC CGCCGGGCAT ATGCCCAAGG ATGCGGATTT TAATTGCGGC GAGAGAAACG GGACATCTCC CGTGGACGCC CATGCCGCGA CATCCGGCGC CTGCGGAGCG ATTGATATGT GGGGCAATTG CTGGGAATGG ACTTCTTCTT CAGTTGAAGT TTCCAAGGCC GTGGCACACG GTAAAACGGT CATGGCGGTG AAGGGAGGTT CCTGGCGTTC GCCGCGGACG AGCTGCCGAA CTGAGCGGAA AGGAGAAGGA AGGGAATCTT CTTTCGCTTT CAGTGATGTC GGTTTCCGGG TCGTCCGCGA AGGTTGA
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Protein sequence | MSINLQKVII AVCAAATVSA GFAARTEGAK LHRFSTTIEK ERPQLNEETK RLIASYRRDP SEANRSALRK QVGINYDKVL DRKKAKLEEL KRTARHASKI QEMQEIVDEM VQNREARIDQ SMRRFSDPRF RPGARYADGG YLPVLGASWN VSIAYTPVTN EDYAQFLKAT GRKAPKDWDN GAMPAGKGRH PVVNVSYDDA SAYCQWLSLQ DRKAVYRLPT EEEWEFAAGH MPKDADFNCG ERNGTSPVDA HAATSGACGA IDMWGNCWEW TSSSVEVSKA VAHGKTVMAV KGGSWRSPRT SCRTERKGEG RESSFAFSDV GFRVVREG
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