Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1147 |
Symbol | |
ID | 6273886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1375379 |
End bp | 1376257 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642613199 |
Product | hypothetical protein |
Protein accession | YP_001877754 |
Protein GI | 187735642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.409203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0000175606 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTGTCCA ATTCAATATG TTCATATATT CCGGAGTTGC CACCGAATGC CCGTGAATAT CCAAACAAGT GGAATTCGCA GAAATGGAAT AAATGTGGTA AAAAATGGAT TTCTTTTTTA TGGCGTGTTT TTTTCTGTGA AGATAATAAC TGCGTTCCTT CGTATGAGCA CTATTCTCAT TTATATATTG GTTTTCAGTC CAGTATGGAT ACCCTTTATT TCATGAATAA TGGGGCGGTA ATTCACTTTT TCTCAAAGAA AAAAGGGAAA AAAGAGATAG AGGAAATTCG TTTTTATACA AGTCAGCAGG CTGATAGAAA TGGAATTCGC ATTCAGAATT ATCTACATAA TTCCTCTTAT CAAAATATTC CTATTTATTG GGAAGGGACA GGTGGTCTTT ATCCTCTTGA AGGAGGATTT ATTGTCACAC CAAGTTTTTG TTCCAGCGGA AAGCTTTGCG ATATGAAAGC TTATGAACTT AATCATATTG AAAATTCACG CAGTATCGAT TTTGTGCAAG GAGCTTTTAG TCTGGCAAAA TATCCGGAAG AAAGTCGTGC ATTTAGAGAG CTTCCTTCGT ATTTCTGTGA ACTGGCAGAT TCCTCATTTG ACTATGAATC ATGGGAGATG GCTATGACAT CGGAATCCAT TCCTCTGGAA CACAACTGTG TTCATCCGTT TTATAAGAAT GACATATGTA TAGCTGAATT GGTAATTGTT AATTTAATAT GGGGAACTTC TTATTATCCC TATCAAGATT CATATGTACT TTTGTTACGC TACTCTCCAT CAGTAGAATC TTGTGTTATC CAACTTGTTG ACCTTGTATT GGAAAAATTT CCCAGTATCA GATTAATAGA AAATAAAGAA ATTATATGA
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Protein sequence | MLSNSICSYI PELPPNAREY PNKWNSQKWN KCGKKWISFL WRVFFCEDNN CVPSYEHYSH LYIGFQSSMD TLYFMNNGAV IHFFSKKKGK KEIEEIRFYT SQQADRNGIR IQNYLHNSSY QNIPIYWEGT GGLYPLEGGF IVTPSFCSSG KLCDMKAYEL NHIENSRSID FVQGAFSLAK YPEESRAFRE LPSYFCELAD SSFDYESWEM AMTSESIPLE HNCVHPFYKN DICIAELVIV NLIWGTSYYP YQDSYVLLLR YSPSVESCVI QLVDLVLEKF PSIRLIENKE II
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