| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1127 |
|---|
| Symbol | |
|---|
| ID | 6273931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1350951 |
|---|
| End bp | 1351412 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642613178 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001877734 |
|---|
| Protein GI | 187735622 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.197212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAACC CTGATCAATT ATCTCCGGAA CAGATCCAGT CCATCCGAAC CTGGGCGGAA
GAAGGACTGG ATTTAAACGC CATCCAGAAA AGGCTGCATG AGGACTTGAA CATCAAGCTG
ACGTTCATGG ATACAAGATT CCTTCTTCAG GATCTGGATA TCCGCATCAG CCAGCCGGAG
CCGGAACCCG AAGCCGAGCA GCCCGGAGAG CTTCCCGGAA CAATGCCTCC CCCTGCCTCC
CTGCTGGGAA AAACCCAGGT AACTGTGGAT GAAATAACGC CTCCCCACGC CCTGATGGCC
GGCAAGGTTT TATTCAAGAG CGGCGCCCAG GGCGCATGGG ATATTGACCG TACCGGCCGT
ATCAACTGGG ACGCTACGCT TGGAGAACCT ACGGCAGACG ACCTGAGGGA ATTTGAAACG
GAACTGCAAT CCGTCATTCG CAGCCGCATG GGAGCCATGT GA
|
|---|
| Protein sequence | MINPDQLSPE QIQSIRTWAE EGLDLNAIQK RLHEDLNIKL TFMDTRFLLQ DLDIRISQPE
PEPEAEQPGE LPGTMPPPAS LLGKTQVTVD EITPPHALMA GKVLFKSGAQ GAWDIDRTGR
INWDATLGEP TADDLREFET ELQSVIRSRM GAM
|
|---|
| |