| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1116 |
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| Symbol | |
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| ID | 6273956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1334351 |
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| End bp | 1335268 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613167 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_001877723 |
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| Protein GI | 187735611 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCTA CACCGAACAG CCTTTTCCGC CATTATCTTG ATTCCCTGAT CCAGCAGGGA
ACAACGCGAA CGAGCCTGAC GGATGAAGCC AGAAACGTTC TCAGAACATG GTACGTGGCT
TCCAGGCAGG GAGGCCGTCC CGCCGCATCA GCACCCGCTT CTCCGGAACC GCCGCCCCTG
CAGGCAGCCG CTCCTGCCTC CGCTCCTGCC TCCGCTCCTG CCGGAAAGCC GGAACCGCCG
GAGCTGTTTC CGCAAAACAG GGAACCGGCC TCTGCCATTA CCCTCCCGGA AGGGACAATG
GAAGACAAGC TGCAATACCT CCGTAATCTG GCGCAGAACT GGAAACCGGC GCGGGAACTC
AACTCCCTGC GGGACACCAT GGTCTTTGCC ACGGGCAATC CCCATACGAA ACTCATGCTC
ATCGGGGAAG CTCCCGGATA TTATGAAGAA GTGCAGCAGG AGCCCTTTGT GGGCCGTGCC
GGGGAAAAAC TCAACCAGAT ATTAAGGGCC ATGGGGCTCT CCAGAGACAT GGTCTATATT
TCCAATATCG TCAAATTCCG CCCGGCCCTC CCCAACCAGC GGACCAATAA CCGTGCACCC
ACGCCGGAAG AAATTGAAGC ATGCCTGCCC ATCATCATGC ATGAAATCCG GGTCATCCAG
CCGAAAATGA TTGTAGCCTT GGGCGGTACC GCCGCCGTAG GCCTATTGGG GGAACAGGGA
TCCGTCAGTT CCATGCGCGG CAGGTTCCAC GACCTTAACG GCATTCCCGT ACGCGTCACT
TACCATCCCA GTTATCTGCT CAGATCGGAC AGCCCGCGGG AAAAACGCAA GGTATGGGAA
GACATGCTGG CCGTTATGGA ACGCCTGGAC ATGCCCATCT CAGAAAAACA GCGCGGCTAC
TTCCTGCCCA GGGCATAA
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| Protein sequence | MSATPNSLFR HYLDSLIQQG TTRTSLTDEA RNVLRTWYVA SRQGGRPAAS APASPEPPPL
QAAAPASAPA SAPAGKPEPP ELFPQNREPA SAITLPEGTM EDKLQYLRNL AQNWKPAREL
NSLRDTMVFA TGNPHTKLML IGEAPGYYEE VQQEPFVGRA GEKLNQILRA MGLSRDMVYI
SNIVKFRPAL PNQRTNNRAP TPEEIEACLP IIMHEIRVIQ PKMIVALGGT AAVGLLGEQG
SVSSMRGRFH DLNGIPVRVT YHPSYLLRSD SPREKRKVWE DMLAVMERLD MPISEKQRGY
FLPRA
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