Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1106 |
Symbol | |
ID | 6273995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1321347 |
End bp | 1322630 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642613157 |
Product | peptidase M24 |
Protein accession | YP_001877713 |
Protein GI | 187735601 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATACG AGCCGCTTCC TTCTTCCTTT TTTGCCGGCA ACCGTGAAGA ACTTGCTTCC CGCCTGCCTG CCGGCAGTAT GCTGATTCTG CACGCCAACG ACGTATTTCC TACGAATGCG GACGGCACTT TTGCCCTGCA TCAGAATGCC AACCTCTTTT ATCTTACGGG AGTTGACCAG GAAGAAACCG TCCTGGTCAT GACCATCCGG GAGGACGGCT GGGATGAGAT CCTGCTGTTG CGTGAGACAA ATGAACAGAT TGCCATCTGG GAAGGCGCCC GGCTCTCGCA GGAACAGGCG AGAGAGCTGA GCGGCATCCA GGACGTGCGC TGGACCGATG AATATGATGC GCTGCTGGAG GCCCTGGTGC CGTCCGCATC CATGGTCTTT GTGGAAGCCA ACCAGCATCC GCGATGCACA TGCCCGGTGG AAACGCGCAA TGCCCGCATG ACCAAGGAGC TGAAGGAAAA ATTCCCGGAC GCTGTTTTGA AGAATGTCTA TGAAATCTTG GCGGACATGC GGCAAATCAA AAAGCCGGAA GAAATCAAGG CTCTCAAAAA AGCCTGCGAC ATCACCAATG AAGGCTTCCG GGAATTGCTC CGGTTCATCA GGCCGGGGGT GGGCGAATGG CAGATTGAGG GATTCCTGGC CAACGAATTC ATCAGCCGCG GTCCGCGCAA ATTCTCCTTC CTACCCATCA TCGCTTCCGG AAAGGATACC TGTGTGCTGC ATTATATCCA AAACGACAAA CGGTGCGAAG ACGGCGATCT GGTGCTTATG GACATAGGCA CGGAATACGG GAATTACAAC TCCGACATGA CCCGCACCGT TCCCGTGAAC GGAAAATTCA CTCCCCGCCA GCGCGCTGTG TATGAAAGCG TGCTGAATAT GATGACCTAC GCCAAAAAGA TTCTGAAACC CGGAATCCTG AAATCGGAGT ACGAACGCCT GGTGCGCGTT TTTGCCGCCG GGGAACTCGT CAAGCTGGGG CTGATCACAC CCGCGCAGGT GGCGGAAAAA CCGTCCGATC CTCCCATTGT CCGGAAATAT TACATGCACG GGTGTTCCCA CTTCCTGGGG CTGGATGTGC ACGATGTGGG CGAAGCCAAC CCCGTTGTGT TGCCGGGCAT GGTTTTCACC GTGGAACCGG GCATCTATAT TGCGGAAGAA GGCATAGGCA TCCGTTTGGA AAACGACGTC CTGATCGGGG AAACAGAAAA CATCGACCTG TTGGGAGACG TGCCTTTGCT GCCTGATGAC ATTGAACGGC TCATGGCCCG GTAA
|
Protein sequence | MRYEPLPSSF FAGNREELAS RLPAGSMLIL HANDVFPTNA DGTFALHQNA NLFYLTGVDQ EETVLVMTIR EDGWDEILLL RETNEQIAIW EGARLSQEQA RELSGIQDVR WTDEYDALLE ALVPSASMVF VEANQHPRCT CPVETRNARM TKELKEKFPD AVLKNVYEIL ADMRQIKKPE EIKALKKACD ITNEGFRELL RFIRPGVGEW QIEGFLANEF ISRGPRKFSF LPIIASGKDT CVLHYIQNDK RCEDGDLVLM DIGTEYGNYN SDMTRTVPVN GKFTPRQRAV YESVLNMMTY AKKILKPGIL KSEYERLVRV FAAGELVKLG LITPAQVAEK PSDPPIVRKY YMHGCSHFLG LDVHDVGEAN PVVLPGMVFT VEPGIYIAEE GIGIRLENDV LIGETENIDL LGDVPLLPDD IERLMAR
|
| |