Gene Amuc_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1106 
Symbol 
ID6273995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1321347 
End bp1322630 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content55% 
IMG OID642613157 
Productpeptidase M24 
Protein accessionYP_001877713 
Protein GI187735601 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATACG AGCCGCTTCC TTCTTCCTTT TTTGCCGGCA ACCGTGAAGA ACTTGCTTCC 
CGCCTGCCTG CCGGCAGTAT GCTGATTCTG CACGCCAACG ACGTATTTCC TACGAATGCG
GACGGCACTT TTGCCCTGCA TCAGAATGCC AACCTCTTTT ATCTTACGGG AGTTGACCAG
GAAGAAACCG TCCTGGTCAT GACCATCCGG GAGGACGGCT GGGATGAGAT CCTGCTGTTG
CGTGAGACAA ATGAACAGAT TGCCATCTGG GAAGGCGCCC GGCTCTCGCA GGAACAGGCG
AGAGAGCTGA GCGGCATCCA GGACGTGCGC TGGACCGATG AATATGATGC GCTGCTGGAG
GCCCTGGTGC CGTCCGCATC CATGGTCTTT GTGGAAGCCA ACCAGCATCC GCGATGCACA
TGCCCGGTGG AAACGCGCAA TGCCCGCATG ACCAAGGAGC TGAAGGAAAA ATTCCCGGAC
GCTGTTTTGA AGAATGTCTA TGAAATCTTG GCGGACATGC GGCAAATCAA AAAGCCGGAA
GAAATCAAGG CTCTCAAAAA AGCCTGCGAC ATCACCAATG AAGGCTTCCG GGAATTGCTC
CGGTTCATCA GGCCGGGGGT GGGCGAATGG CAGATTGAGG GATTCCTGGC CAACGAATTC
ATCAGCCGCG GTCCGCGCAA ATTCTCCTTC CTACCCATCA TCGCTTCCGG AAAGGATACC
TGTGTGCTGC ATTATATCCA AAACGACAAA CGGTGCGAAG ACGGCGATCT GGTGCTTATG
GACATAGGCA CGGAATACGG GAATTACAAC TCCGACATGA CCCGCACCGT TCCCGTGAAC
GGAAAATTCA CTCCCCGCCA GCGCGCTGTG TATGAAAGCG TGCTGAATAT GATGACCTAC
GCCAAAAAGA TTCTGAAACC CGGAATCCTG AAATCGGAGT ACGAACGCCT GGTGCGCGTT
TTTGCCGCCG GGGAACTCGT CAAGCTGGGG CTGATCACAC CCGCGCAGGT GGCGGAAAAA
CCGTCCGATC CTCCCATTGT CCGGAAATAT TACATGCACG GGTGTTCCCA CTTCCTGGGG
CTGGATGTGC ACGATGTGGG CGAAGCCAAC CCCGTTGTGT TGCCGGGCAT GGTTTTCACC
GTGGAACCGG GCATCTATAT TGCGGAAGAA GGCATAGGCA TCCGTTTGGA AAACGACGTC
CTGATCGGGG AAACAGAAAA CATCGACCTG TTGGGAGACG TGCCTTTGCT GCCTGATGAC
ATTGAACGGC TCATGGCCCG GTAA
 
Protein sequence
MRYEPLPSSF FAGNREELAS RLPAGSMLIL HANDVFPTNA DGTFALHQNA NLFYLTGVDQ 
EETVLVMTIR EDGWDEILLL RETNEQIAIW EGARLSQEQA RELSGIQDVR WTDEYDALLE
ALVPSASMVF VEANQHPRCT CPVETRNARM TKELKEKFPD AVLKNVYEIL ADMRQIKKPE
EIKALKKACD ITNEGFRELL RFIRPGVGEW QIEGFLANEF ISRGPRKFSF LPIIASGKDT
CVLHYIQNDK RCEDGDLVLM DIGTEYGNYN SDMTRTVPVN GKFTPRQRAV YESVLNMMTY
AKKILKPGIL KSEYERLVRV FAAGELVKLG LITPAQVAEK PSDPPIVRKY YMHGCSHFLG
LDVHDVGEAN PVVLPGMVFT VEPGIYIAEE GIGIRLENDV LIGETENIDL LGDVPLLPDD
IERLMAR