| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1086 |
|---|
| Symbol | |
|---|
| ID | 6274017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1298356 |
|---|
| End bp | 1298763 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642613137 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001877693 |
|---|
| Protein GI | 187735581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000829745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 1.57217e-16 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG TTCAATGGGA AATTTCAAAT GATGAAGTGA CCGACCGTGA TACTGCTCTG
CGCCGCTTGC AGGAAGGAAC GACCGGCCAC GTGGTGTGCG CCCGCGACGG CGCGTGCCTC
CAGTCTTATA AGGAAGCGGA TGGCGTGTAC CATTGCGAAA TTGTATTCAA GACGGATTCC
TGCTGCCCGC CGGTATTCGC CGCCCCGGAA GGGGTGACGG GAAAGGAGCT GGAAATGCTT
TACGATCGTT TTGCCAATGG GGACGATTTT TCCTTTGTGG AAAAGGAATG GGAACCTCTG
ATGGCCGTGG AATACCGCCA TCGCCACAAT GTGATGTGGT TCATCTTCCT GTTCATTGCG
CTGGTAATTG CGGCCATGGC GGCATATCAG CACGGTTGGA TTGAGTGA
|
|---|
| Protein sequence | MSKVQWEISN DEVTDRDTAL RRLQEGTTGH VVCARDGACL QSYKEADGVY HCEIVFKTDS
CCPPVFAAPE GVTGKELEML YDRFANGDDF SFVEKEWEPL MAVEYRHRHN VMWFIFLFIA
LVIAAMAAYQ HGWIE
|
|---|
| |