| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1085 |
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| Symbol | |
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| ID | 6274019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1296592 |
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| End bp | 1297809 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642613136 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001877692 |
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| Protein GI | 187735580 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000116954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 8.02155e-19 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAAGC ATAACATAAT AGCAATGGCG TTGACGAGCC TCATGGCGCT TCCTGTAATC
GCTCAAGACA GCACCCCTGC TGTTGGTGAT ATTTTGCAGG GCATCAACAT GTTCACTCCG
GAAGAAGGTG ATCCTGCCTG CAAGGTGAAG GCCAATGAGA AATACGGCAC CCAATGGGGT
GTGGATATGG CCTACGGGCT TTGGAATACG GAAAAGGTTT CCGATGTTAA GCGCCATAAC
AACCTGGCTC TTCTTCATGC CCAGCTTAAT CAGCGCCTTA TTGAAGACAA GGCCAACGGG
GGAACCTGGT TGCGTGTGGA ATTTTCCGGT TCATGGGGGC TGGATCGTGA ATCCGCACAG
AGCGATACGT TTTTCACTGA AGCCTATGCC ACGGCTTCCG GCTTGCATGC TGACGCGATG
GGGCCTCATG AAGGAATATT CCCTGAAGTG GCGCTGATGC AATACTTTGC AGGGAAGCGC
GCTTGCCTCA TCGCAGGTAT GGTGAATCTC ACCAACTACT TTGATGCTGT CAGCATTGCC
AATGACTCCT TCTCCTCTTT CACCAATGAC GGGTTTGTGA ACTCCACTAT CCTACCTTTG
GTGGACAGCA ATATTGGCGG TATTCTGCAA GTTGAACTCA ACCGCAATAA TTACATGATG
GTTGCCGTTT CCCGCACGGG ATGCGATTCC GGATACAATC CTTTTAATTC CGATTATTGC
GATGGTTATG CCGTGGTTGG CGAATACGGC CATATCTTTG CCGACGGCGC TGCGACTCTC
CGCATCAATC CGTTCTATAC CAGCACGGAT GTGGACATGG ACGACGGGAC CGGGGAACGC
CGCCGCCAAA ATGCCGGGCT TGTCGCGAGC ATCGAATATA CTCCCTGCGA TCCTCTGACC
ATTTACTCCC GCGCCGGATT TGCCGCCAAA CAATACTTGA GCAACTCCGC TGAATTCTCC
GTGGGCGCCA ACATTAAGCT CTTCCCTTCC CGTGAAGATG ACTTCCTGGG CATTTCCTAC
GGTGTGTTCA AGGGGCAGAC CCCCTGTGAC GGAGAGCGCG CTGAGCATAA CCGCGAACAG
GTGCTGGAAG TCATGTACAG CTTCCAGGTG AATGATTATT TCAAAGTTGT TCCTCACTTC
CAGTACATCG CGAATCCGGC TTACAGCACT TCCAGCGAAA ACATTCTCTG GGGCGTTCAG
GCAGTCTTTT CTTTCTGA
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| Protein sequence | MKKHNIIAMA LTSLMALPVI AQDSTPAVGD ILQGINMFTP EEGDPACKVK ANEKYGTQWG
VDMAYGLWNT EKVSDVKRHN NLALLHAQLN QRLIEDKANG GTWLRVEFSG SWGLDRESAQ
SDTFFTEAYA TASGLHADAM GPHEGIFPEV ALMQYFAGKR ACLIAGMVNL TNYFDAVSIA
NDSFSSFTND GFVNSTILPL VDSNIGGILQ VELNRNNYMM VAVSRTGCDS GYNPFNSDYC
DGYAVVGEYG HIFADGAATL RINPFYTSTD VDMDDGTGER RRQNAGLVAS IEYTPCDPLT
IYSRAGFAAK QYLSNSAEFS VGANIKLFPS REDDFLGISY GVFKGQTPCD GERAEHNREQ
VLEVMYSFQV NDYFKVVPHF QYIANPAYST SSENILWGVQ AVFSF
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