| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1080 |
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| Symbol | |
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| ID | 6274025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1291233 |
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| End bp | 1291814 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613131 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_001877687 |
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| Protein GI | 187735575 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.211131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.000000773315 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCATGA GACCCCAAGG GAACGAACAG GAAGCGCGCC GGAACAAGCA TGTGCGCAGC
GCGCCGTCCA AAATTGCCGT GAAGGCGCTG GGAGAGGAGG TGCTGGACGG GATTCTGGAC
AAATCCTCCA ACCCTCTGCT GCTTATTCTG GACTGCGTGC AGGACCCCCA CAACCTGGGA
GCCATCCTGC GGACGGCGGA CGGCGCGGGA GTGGATGCCG TCATCGCCCC CCGGGACAAA
TCCGTGGGCA TTACGGAGAC GGTGCTGCGC GTTTCCGTCG GCGCTGCGGA AAAGGTGCCT
TTTATTCAGG TGACCAATCT GGCGCGCACC ATGAAGCAGC TCCAGAGCCG CGGCATCTGG
ATATTCGGCA CGTCGGACAA AGGAGACCGC GGCCTGTATG AAACGGACTT CACGGGGCCG
GCCGCACTGG TGATGGGGGC GGAAGGGGAA GGGATGAGAA GATTGACGGA AGAGAACTGC
GATTTCCTGC TGAGGATTCC CATGAAGGGA AGCATTCCGT GCCTGAACGT ATCTGTGGCT
ACGGGCGTAT GCCTGTATGA AATGGTGCGG CAGCGTTCCT GA
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| Protein sequence | MGMRPQGNEQ EARRNKHVRS APSKIAVKAL GEEVLDGILD KSSNPLLLIL DCVQDPHNLG
AILRTADGAG VDAVIAPRDK SVGITETVLR VSVGAAEKVP FIQVTNLART MKQLQSRGIW
IFGTSDKGDR GLYETDFTGP AALVMGAEGE GMRRLTEENC DFLLRIPMKG SIPCLNVSVA
TGVCLYEMVR QRS
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