| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1058 |
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| Symbol | |
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| ID | 6274052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1261959 |
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| End bp | 1262585 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613109 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001877665 |
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| Protein GI | 187735553 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAAAC GGAAATCCAC CAGAGAGCAC CTGCTCAATA CGGGTGCCAT GATTGTCGGG
GAATCCGGGC TGCGCGCCCT TACCGTTCGC GGCCTGTCCC TGCGGGCCGG CACCAATACA
GGGAGCTTTG TCTATCACTT CGGCAACCGG GAAGCTTTTC TGACCGAGCT TCTGGAACGC
TGGTACGAAC CTCTGTTCAC CGGCATCAGG ACCCATGCCA ACATTCATCT TCCGGCCTTT
GAAAAACTGG AAGCCATCCT GGGAGACGTC ATGGAGTTCC TGCTGCGTCA CGGCCAATTC
ATTGCCCAGC TGGTTCTGGA CGCCCTGGCA GGGGAACAGG CGGCCATCCG TTTCATTTCA
GGAATCCATA CGCGCCATCC CCTTGTGCTG CTGGAAACCA TACGGGAAGC CCAGCAGGAA
GGATCCGTGC TCATGGGAGA CCCCATGAAC ATCCTCATTT ACCTTGTCTG CTGCGGGGGA
GCCCCCTTTA TCCTTTCCGG ACAGCTCCAA GTGCACGACC CCAAAGCAGC TCGGCCCGTT
CTCGACTTGC TGGGTTCTAT CCTCAATGAT CCGGAAAGCG CCAGACAACG CATGACCTGG
GCGCTCCGCG GCATACGGCG GGTCTGA
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| Protein sequence | MPKRKSTREH LLNTGAMIVG ESGLRALTVR GLSLRAGTNT GSFVYHFGNR EAFLTELLER
WYEPLFTGIR THANIHLPAF EKLEAILGDV MEFLLRHGQF IAQLVLDALA GEQAAIRFIS
GIHTRHPLVL LETIREAQQE GSVLMGDPMN ILIYLVCCGG APFILSGQLQ VHDPKAARPV
LDLLGSILND PESARQRMTW ALRGIRRV
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