| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1027 |
|---|
| Symbol | |
|---|
| ID | 6274090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1218763 |
|---|
| End bp | 1220757 |
|---|
| Gene Length | 1995 bp |
|---|
| Protein Length | 664 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642613076 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001877634 |
|---|
| Protein GI | 187735522 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTGT CTGTTCAAAA CCTGCGTGTG CAGTATGGCG CGCGCGTCCT GTTCAATGAC
CTTTCCTTTA CAGTGGAGGA TGGGGAAAGA ATTGCCCTCG CGGGCCATAA CGGCGCGGGG
AAATCCACGC TGATGAAGTG CATCGCCGGT TTGAATGAAC CGGATTCCGG CTCCATTATC
AAATCCAGGC ATTCCCAGGT GGGTTATCTG CCCCAGGAAG GAATTCATAT CCGAGGGCGC
AGGCTGATTG ATGAAGCCAT GTCCGCCTTT GCGGACCTGA TGGATCTTCA GGAGCGCATT
GATGTCCTGA CGCGGGAAAT GGCGGGGCTG GATCCCCGTT CCGCCGCCTA CTCTGAAGTT
CTCAATGAAA TCGGGGAATT GGAACTGGTG CTGCATGCCC ATAATTCCGC CCGGCTGCGT
CCCCGGACGG AATCCATCCT GCGCGGCCTG GGATTCAAAG ACAGGGATTT TGACCGGGAT
TGCGGAGAAT TTTCCGGCGG CTGGCAAATG CGCATCGCAT TAGCCAAACT GCTGCTCCGG
GAGCCTGAAG TGCTGCTTCT GGACGAACCT ACCAACCATT TGGACATCCA GTCCCAACGG
TGGATGGAAC AATATCTGCG CTCCTACCGG GGCGCTATCA TCCTTATTTC CCATGATGTG
GCGCTTCTGG ATGCCCTGGT TTCCCGTACG ATTGCTTTTT ACCACGGCCG GGCGGAGGAG
TACGCGGGCA ATTTTTCCTA TTTTCTGAAA GAAAGCGTGC TGCGGAAGGA AATTCTGCTG
CGCCAGAAAA AGGCTCAGGA CCGGGAGATT GCCAAAACGA AGGAATTTAT CGACCGTTTC
CGTTATAAAG CCACCAAGGC TTCTCTGGTT CAGTCCCGCA TCAAGCAGTT GGAAAAAGTG
GAACTGATTG AGGTGGAAGA GGATGATGCC GTCATGAACT TTCACTTTCC TGCTCCTCCC
GCTGGCGCCC ATTCTGTGGT CAGGCTGGAA AAGGTTTCCA AACATTATGG TTCCGTTTCC
GTTTTTGAGA ATGTGGATTT TGAAATCGTC AAGGGGGACC GCATTGCCAT TGTAGGAGTA
AACGGGGCGG GGAAATCCAC ATTTTCCCGC CTTATTTCCG GCGGAGAGGC CCCCAGTTCC
GGCAGCGTGA CCATGGGACG CCATACGCAG GTAGCTTTTT TCTCCCAGAC GCATGCTGAT
GATCTGGATC CGGATAAAAC GATTTTGGAA TGCGTGGAAG CTGCCGCCAC GCGGGAATCT
GCGCCCATGG TCCGGAATCT GCTTGGCTGT TTCCTGTTCC GGGGGGATGA CGTACACAAG
CGCGTTGGCG TGCTTTCCGG AGGCGAGCGC TCCCGCGTGG CGCTGGTGTG CATGCTTTTG
CATCCGGCCA ATTTCCTGAT TCTGGATGAA CCGACCAATC ATCTGGACAT CCAGTCCCAG
CAGGTGCTTC AAAAGGCTCT GTCCGAATAT CCGGGTTCCT ACTGCATCGT TTCCCACAAC
CGCAGTTTTT TGGATCCCAT CGTGACGAAA GTGCTGGAAT TTGTACCGGG AGAGAAACCG
CGCGTTTACC TGGGCAATGT TTCTGATTAT TTGGAAAAGG TGGAGAGGGA GCAGGCCCTG
GCTGCCGCAG CCGCCTCACC CCCCTCCGGA GCGGCGGAAC CGGGCGCCGG ATTGGATCGC
AGGGCACGCA GGCGCATGGA GGCGGAAATC CGTCAGAAGA AGACGCGCCT GCTGCGTCCG
CTTCAGGAGA AACTGGAGCT GCTGGAAGAA GAAATAGCGC GGCTGGAAAC GGAAAAGACG
GAAATTACTT CTCAATTGGA GCGTCCGGAA GTGGCGGCTG ATACGGAAGC CGTCATGGAG
CTTACCTCCC GTTTTCAGCA GACGGACCGG CAGCTGGAAA CCTGTTTTAC ACAATGGGCT
GATCTTTCGG AAAAGATTGA AGAGACGGAA GCCCGCATTC AAGAAGAGGC GGAAAGAAAC
GTTTCCGGAA GCTGA
|
|---|
| Protein sequence | MVLSVQNLRV QYGARVLFND LSFTVEDGER IALAGHNGAG KSTLMKCIAG LNEPDSGSII
KSRHSQVGYL PQEGIHIRGR RLIDEAMSAF ADLMDLQERI DVLTREMAGL DPRSAAYSEV
LNEIGELELV LHAHNSARLR PRTESILRGL GFKDRDFDRD CGEFSGGWQM RIALAKLLLR
EPEVLLLDEP TNHLDIQSQR WMEQYLRSYR GAIILISHDV ALLDALVSRT IAFYHGRAEE
YAGNFSYFLK ESVLRKEILL RQKKAQDREI AKTKEFIDRF RYKATKASLV QSRIKQLEKV
ELIEVEEDDA VMNFHFPAPP AGAHSVVRLE KVSKHYGSVS VFENVDFEIV KGDRIAIVGV
NGAGKSTFSR LISGGEAPSS GSVTMGRHTQ VAFFSQTHAD DLDPDKTILE CVEAAATRES
APMVRNLLGC FLFRGDDVHK RVGVLSGGER SRVALVCMLL HPANFLILDE PTNHLDIQSQ
QVLQKALSEY PGSYCIVSHN RSFLDPIVTK VLEFVPGEKP RVYLGNVSDY LEKVEREQAL
AAAAASPPSG AAEPGAGLDR RARRRMEAEI RQKKTRLLRP LQEKLELLEE EIARLETEKT
EITSQLERPE VAADTEAVME LTSRFQQTDR QLETCFTQWA DLSEKIEETE ARIQEEAERN
VSGS
|
|---|
| |