Gene Amuc_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1022 
Symbol 
ID6274095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1214499 
End bp1215464 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content62% 
IMG OID642613071 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_001877629 
Protein GI187735517 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAT CATCCCCACC CCCCGGAATC CGCGCCTCCC TGAATGAGGC GGGAGAACTG 
GTACTTACCG CGGTGAACGC TCCCCCGGAA GCCGTCATCC GAATAGACGT GAATGCGGAC
TCTCCCCGCA TGCTCTGCAC GCAGGGCCGC TATCTGGCTC CGGTGCAGGC CCCGCCCGGC
GCGCGCATCC GCTTCCGCCT GTTCCGGGGA AAGCGCGGCA TTACAGCCCC GGAAACCTTC
ATCATGCCCG GACCTCCTCC CGCCCGGGCC GTACCCTCCA CGCTGATTCC CTGCACCCAG
GACCGGGACT TCATGATTTA CGACTGGGCG TCCCGGCATG AAGCCGCATG CCGCATCGTG
CGCGAAACAC ACCCGGACCT CCTCTTCATC GGAGACTCCA TCACGCATTT CTGGGGAGGT
GCGCCCGTGG ATGAACCGCA CCGGGACATT TTGCAAAAAT CCCCGGAAAC ATGGAACCTG
TGCACGGCGG GAATGCGGGC GGTCAATCTG GGGTTTGGCT ACGACCGGGT GGAAAACGCC
CTGTGGCGGC TCCGCCACGG AGAACTAGAC GGTGCGGAAG ACAATGCCGT TTGCGTGGTG
CTCCTGGGCA CGAACAACCT TGCGGAAAAC ACGGACGGGG AAATCCTGGA AGGCATTCGT
GCCGTCTGCC GGGAAATCAC CGGCAAACTG GCAAAAGCCG TCATCATCCT CCAGGGATTT
TACCCGCGCA ACAGCGCCCG GGAAGGTACG GCGGAACGCA TTGCCGGCAT CAATCTCCTC
CTGAATCGCC TGGCCGCGGA AGAAAATTTC ATTTATACGG AACCGGGACG CGTCATGGCT
AATAGCGACG GATACGTCCC GGAAGAGCTT TCCAGCGACG GACTGCACCC TTCTGCGGCC
GGTTACGCAC GCATCGCCGC CGTACTGGCC CCCGTCATCA GACAGGCGGC AGAACGGGAA
AAATGA
 
Protein sequence
MTESSPPPGI RASLNEAGEL VLTAVNAPPE AVIRIDVNAD SPRMLCTQGR YLAPVQAPPG 
ARIRFRLFRG KRGITAPETF IMPGPPPARA VPSTLIPCTQ DRDFMIYDWA SRHEAACRIV
RETHPDLLFI GDSITHFWGG APVDEPHRDI LQKSPETWNL CTAGMRAVNL GFGYDRVENA
LWRLRHGELD GAEDNAVCVV LLGTNNLAEN TDGEILEGIR AVCREITGKL AKAVIILQGF
YPRNSAREGT AERIAGINLL LNRLAAEENF IYTEPGRVMA NSDGYVPEEL SSDGLHPSAA
GYARIAAVLA PVIRQAAERE K