Gene Amuc_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1019 
Symbol 
ID6274098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1211402 
End bp1211977 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content48% 
IMG OID642613068 
Producthypothetical protein 
Protein accessionYP_001877626 
Protein GI187735514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCTTCCGGTA TTTAATACTT CTGGCAAACC TGTCCCTCCA TGCTGCGGCG 
TGGGGGGACA TGGCCGACAA CGGAGTGGAA TGTTCCGTGG TGATGGAAAA GACCCGGTTT
GACACAAGAG AGACGTTCCC TGACTTCAAG CTGGTGTTCA CGAACAAGGG CGAAAAGACC
GTGCGCCTGT TCGACGACTT TTATCCCCTG AAGGATCATA GCCCTAATAT CCACATCGAA
ATATGGCGAA AGGAAGGCGG GAAAAGAATT GGGTGTATAG GGAGCGTAAT AAGCGATGGA
AAGAAGCCTT TAGCTTGGTA TAGTCCCCTG TATACAGTTG AACGTCTACC GTTTTCCATA
CGTTTCATTA CGTTGCAGCC GGGAGAAAAG CATGAAGTTC CCATCCAGGA AGCTTATTTG
TTGCTGACGT ATTTAGAGCA CCTTCGCAAT AACAAGAGGT ACGAGCTTGA AGTCAGATTC
AAGGATGGAT TTGCGAACTC CGGTGTTCGA AGGGAGTATG TAGGGAAAGC AGATTTTGAA
ACAGTGAGCC GGTCTCCCAA AGGAGCCTTG CCTTAA
 
Protein sequence
MKKIFRYLIL LANLSLHAAA WGDMADNGVE CSVVMEKTRF DTRETFPDFK LVFTNKGEKT 
VRLFDDFYPL KDHSPNIHIE IWRKEGGKRI GCIGSVISDG KKPLAWYSPL YTVERLPFSI
RFITLQPGEK HEVPIQEAYL LLTYLEHLRN NKRYELEVRF KDGFANSGVR REYVGKADFE
TVSRSPKGAL P