| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0993 |
|---|
| Symbol | |
|---|
| ID | 6274133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1185518 |
|---|
| End bp | 1186723 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642613043 |
|---|
| Product | protein of unknown function DUF323 |
|---|
| Protein accession | YP_001877602 |
|---|
| Protein GI | 187735490 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGCA TTTTCCTTGT TTCCTGCTTT CTGGGAGGAA GCGTCCTGCT GGCCGGGTGC
CGGGAAGAAA ATAATTCCCC CCGCCCGGCC ACGGAAGATG CCGCGCGCAT TACCAGCGCA
CGCCAGTGGG GAGAAAGCCG ATCCGCGCTG CAAAAACGGG AACTGGACCG CGCTGCCGGT
CCTGCCCTTC CCATTCCGGA TGACCTGCCG TCCCGGGAGC TGGTCGGCAC GACGCGCCAA
ATCCATCAGC TCATTGAAGC TTCCGGAAAT CCGGCACGTT TTGAATCCTA CACGGAAACG
GTTCCCGCGG CGGGAGCTTC CCTGCGCATG GTCGCCATAC CGGGAGGAAC GTTCCTCATG
GGGAGTACCG CGGAAGAGCC GCACCGGAAA CCGGACGAAG GACCGCAGCA TAAAGTGAGC
ATCTCTCCCT TCTGGATCTC GGAAACGGAA ATCCCCTGGG AACTTTATAC GGCCTTCATG
GAAAACGGGC GTCCGCGCGC CAAGGACGGT CAGCTTCTGG AGGAACAGCC GGATGACGAA
CTGTGGGACT CCGTTACGCA GCCTACCGCC CCCTACACCG CCATGAACCT GGGCATGGGT
CACGGCTATG AACACGGTCT GCCCGCCATC TCCATGTCCC ACCACGCCGC CAGCAAATTC
TGCGAATGGC TGAGCGCCCA GACCGGGCAT TACTACCGCC TGCCCACGGA GGCGGAATGG
GAATACGCCT GCCGGGCCGG CTCCCCCGGC GCCTATTCTT ACGGAAACGG GGAAGCCTCT
CTGGACCAGT ACGCCTGGTA CTGGAACAAC TCCAATGACC GCTACCAGAA AACAGGCTCT
AAAAAACCAA ATAAGTGGGG ACTCCGGGAC ATGCACGGAA ATGTGGCGGA ATGGGTTTTG
GACTCTTACG TTCCGGATGC CTACGGCAAA CGGAGCGGCT TGCCCGCGAA AGACCCCCTG
GTCATCATCC CCGGCGCCCC TCACATCGTT CGCGGCGGTT CGTGGGAAGA CGACCCGGAC
AGCCTGAGAA GCGCTGCGCG CCGCGCCAGC ACCCCTGCCT GGAACCGTCA GGATCCTCAA
AACCCTAAAA GCATCTGGTA CCTGACGGAC GGAGGCATGA TCGGGTTCCG CGTGGTGCGC
CCCATGAACA TTCCGGACGT TATGACGATG CACCGCCTCT GGAATTTCTC CAAGGGGGAG
CCGTAA
|
|---|
| Protein sequence | MRGIFLVSCF LGGSVLLAGC REENNSPRPA TEDAARITSA RQWGESRSAL QKRELDRAAG
PALPIPDDLP SRELVGTTRQ IHQLIEASGN PARFESYTET VPAAGASLRM VAIPGGTFLM
GSTAEEPHRK PDEGPQHKVS ISPFWISETE IPWELYTAFM ENGRPRAKDG QLLEEQPDDE
LWDSVTQPTA PYTAMNLGMG HGYEHGLPAI SMSHHAASKF CEWLSAQTGH YYRLPTEAEW
EYACRAGSPG AYSYGNGEAS LDQYAWYWNN SNDRYQKTGS KKPNKWGLRD MHGNVAEWVL
DSYVPDAYGK RSGLPAKDPL VIIPGAPHIV RGGSWEDDPD SLRSAARRAS TPAWNRQDPQ
NPKSIWYLTD GGMIGFRVVR PMNIPDVMTM HRLWNFSKGE P
|
|---|
| |