| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0972 |
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| Symbol | |
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| ID | 6274178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1162391 |
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| End bp | 1163335 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613026 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_001877585 |
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| Protein GI | 187735473 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.319816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.276171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATCG TCTTCATGGG CACAGGCGAC ATTGCCATTC CCGCCTTCCG CAGCCTGATC
CGTCACTCGG ACCTGGCAGG CCTGGTCACG CAGCCCGACC GCCCTGTCGG CAGGCATCAG
GTGCTTACAG CCCCGGCCAT CAAAAATATT GCCAGGGAAG CGGGCATTCC CGTGCTCCAG
CCGCATTCCC TGCGCAGCCC GGATGCGCTG AGCAACCTCA GGAGACTGAA TCCGGATCTG
ATCGTCGTCA TGGCGTACGG GCAGATCCTG AGCCAGGAAG TGATTGATAT GGCGCCCATG
GGCTGCATCA ACGCCCATGC CTCCCTCCTG CCGCGCCACC GCGGAGCGGC CTGCATCCAG
TCCGCCATCA AATCCGGCGA TGCAGAAACG GGCATCACCA TCATGCACAT TGTCAGGAAG
CTGGATGCCG GAGACATCAT CGCCCAGATC AGCACCCCCC TGGAAGGCTC GGAAACCGGA
GGCACCCTGC ATGACAAGCT GGCCAGGATG ACACCGGATG TCCTGCTGCC CGTCATCCAT
TCCATTGAAA AAGGGACGGC CACGCGCATC CGCCAGCAGG AAATCCTGGC AACATACGCC
CCCAAGCTCC TGCGGGCGGA CGGAAAAATC GACTGGACGC GCCCCGCAGA AGAAATCGGC
CGCATGATCC GGGCGTACGA CCCGTGGCCC GGTACCTTCA CCAACTACTG GAACCGCAAA
AAACGCATCC GCAACATGAA AATTTTCCCC GGCTTTTCCA TCCTCCCGGA AGCGGAGGGG
AAACCGGGCC AGGTGCTCTC CGCCGGGGAA CAGGGGCTTT TGATCGCCTG CGGAAGCGGA
GGATTGCTGG TGACAGACGT CCAGCTTGAA GGCAGCACGC GCATGAATAT CTCCCAGCTC
ATTGCCGGCC ACCCGAATTT GAAAGATATC CATTTTGACG TATAA
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| Protein sequence | MRIVFMGTGD IAIPAFRSLI RHSDLAGLVT QPDRPVGRHQ VLTAPAIKNI AREAGIPVLQ
PHSLRSPDAL SNLRRLNPDL IVVMAYGQIL SQEVIDMAPM GCINAHASLL PRHRGAACIQ
SAIKSGDAET GITIMHIVRK LDAGDIIAQI STPLEGSETG GTLHDKLARM TPDVLLPVIH
SIEKGTATRI RQQEILATYA PKLLRADGKI DWTRPAEEIG RMIRAYDPWP GTFTNYWNRK
KRIRNMKIFP GFSILPEAEG KPGQVLSAGE QGLLIACGSG GLLVTDVQLE GSTRMNISQL
IAGHPNLKDI HFDV
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