| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0967 |
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| Symbol | |
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| ID | 6274188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1154023 |
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| End bp | 1154688 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613021 |
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| Product | RNP-1 like RNA-binding protein |
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| Protein accession | YP_001877580 |
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| Protein GI | 187735468 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.191765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.616153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACAAC ACAACACACA GGGAAGACAG GGCCAGGGAG CCCGCCGCCG CTACAACAAG
GGCGGACGCT CCTATGGCAA TGACCGCCGC GATTCCAGCG GTTACCGTCC CAAGTACAGA
AAAGAAGCGC CCGCCAAACT CTCCTTGTGG CAGCGTTTCC TGGGCCTCTT CGGCATTCGT
CCGTCCAAGA ATAACAAGCA TGCGGCCAGG GATAAAGCCG CCGCCAAAAC CAACACCCGC
GTAGCCCGCA ACAGGCAAGA TCGCGTTTCC GCACCCAAAC AGCCCGTCTC CAACCGCCGG
CTTTATGTGG GCAATCTTTC CTATGAAGCT ACGGAAAGCG ACCTGGAGGA CGTGTTCAAG
GGCATCGGGG AAGTCAATTC CGTGGAAATC ATTTACAACC CCCGCACCCA CAAGTCCAAG
GGGTATGCTT TTGTGGAAAT GAAGAAGATG GAAGACGCCA TCCGTTCCGT GGACATTCTC
CACAACCAGC CTTTCATGGG CCGCAATCTG CTGGTCAGCG GAGCCAATGA ACGCCAGGAA
CAACCCCGGC AGCCCCGCGA AGACCGCGCG CCCAGGGAAG AACAGGATTC CATGGCGGAA
GTGAAAGAAA CCTCCACTCC CCTGCTCCAG CCGGAAGCTC CCGCTCCCCA GTCCCAGGAA
CAATAA
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| Protein sequence | MSQHNTQGRQ GQGARRRYNK GGRSYGNDRR DSSGYRPKYR KEAPAKLSLW QRFLGLFGIR
PSKNNKHAAR DKAAAKTNTR VARNRQDRVS APKQPVSNRR LYVGNLSYEA TESDLEDVFK
GIGEVNSVEI IYNPRTHKSK GYAFVEMKKM EDAIRSVDIL HNQPFMGRNL LVSGANERQE
QPRQPREDRA PREEQDSMAE VKETSTPLLQ PEAPAPQSQE Q
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