Gene Amuc_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0966 
Symbol 
ID6274190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1153070 
End bp1153816 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID642613020 
Producthypothetical protein 
Protein accessionYP_001877579 
Protein GI187735467 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGGC TCATGAAGGC AGTATACCTG TGTTTGTGCA TGCTGGCGGC GTTCTGTTTT 
CCGGCCGCGG CGCTCCCTGC GGATTGCAGC CAGGTGATTG TAGGTTCCGC GGACGGGTGG
AATAGTTCCC ATGTGCAGTT GAGCCTTTTG GAGAAGGGGC CGCGGGGCTG GGTGATGGTG
AAGGGGCCGT TTCCGGCGCG TCTGGGAAAA TCCGGTCTGG TCTGGGGCAG GGGCGTCAGC
CTCCCTCCCG CCGGAGGGCC GGTGAAGAAG GAGGGGGACT TGCGCTCTCC CGCGGGAATT
TTTGAACTGG GGGGCGTATA TGGAACTGTT CCCGCGCCGC AGAAAAAGCG TTCCATGCCG
TACCGCCGCA TTACGCCGCG GGACATGTGG GTGGATGACC CTGCTTCTCC CCTGTATAAC
CAGCACTTTG TGCTGAAGCA TGATCCCGTC ACGCCTTGGG AGTTCAAGCA GCAGATGAAG
CTGAATGATT ACGCCCACAG TCTGAAACTG TTTATCCGGC ATAATGCCGC AGACGGACGG
CAGAAACCCG TGCCGGGTGC GGGTTCCTCC ATTTTTTTCC ATATCTGGCG CCGGGACGGA
GGAGCCCCTA CGGCCGGATG CACCGCGATG AGCGAGGAAA ATTTGAGGGC CATGATTGCA
TGGCTGGATC CTTCCAGACA CCCCCTTTAT ATTCTGCTCC CCGCCAGGGA ATATTTGCGC
CTGCGCAGAG CCTGGGGGCT GCCGTGA
 
Protein sequence
MLRLMKAVYL CLCMLAAFCF PAAALPADCS QVIVGSADGW NSSHVQLSLL EKGPRGWVMV 
KGPFPARLGK SGLVWGRGVS LPPAGGPVKK EGDLRSPAGI FELGGVYGTV PAPQKKRSMP
YRRITPRDMW VDDPASPLYN QHFVLKHDPV TPWEFKQQMK LNDYAHSLKL FIRHNAADGR
QKPVPGAGSS IFFHIWRRDG GAPTAGCTAM SEENLRAMIA WLDPSRHPLY ILLPAREYLR
LRRAWGLP