Gene Amuc_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0962 
Symbol 
ID6274198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1146758 
End bp1148524 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content60% 
IMG OID642613016 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001877575 
Protein GI187735463 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATA TGTCAGTTAT CAAAGCCTTT CTCGTCAGTC CTCTGAAGTG GCTCCGCGTG 
ACGGTGGCCG TCATTTTCTT TATTGGGATT GCATACGCTT TTCTGCACCA CATTCCCGCG
TGGAACGTGC CGAACATGAC GGGGGGCGGA GAGGGGATGG AAGATTCCTT TTCCCTGGCG
CGGTGGCAAT TTGTGCCGTC CGTGCTGGGG ACCCTGAGCG GGGCAGCCGT TTCCGCCGTG
ATTCTGGGGG TTTTGCTGCT GCTTACGCTG CTGTTCGGCC GCGTATACTG TTCCTTCATC
TGCCCGCTGG GGATTCTCCA GGATATTGTC TTCAGAATCC GCCGCTGGCT GGCGCCGAAG
CGTTTCCTGA AATTCTCCCG GCCTGTGCCG TGGGTGCGGT ATGGGGTGCT GGCATTGCTG
GCCGCCTGCT GCGTGACGGG GCTGGCCGGT CTGTCTCTGA ATTGGCTGGA CCCTTACAGC
ATTTTCGGGC GCATCATGTA TGTGCTGGCA TGGCCGGCCG CCATTTGGAG CAATAACCTG
CTGGCGGCGG ACAGTTCTTC TGCGGACCTG GTCCAGATGG ATTATTTCCC CGCGGCTTTC
CCGGTTCTGC TGGCTTCCGC CGGCATGCTC GGCCTGGTGG CCGTCATGAG TGCCTGGAAG
GGGCGCCTGT ATTGCAATAC GGTATGCCCC GTCGGCACGC TGCTTGGCCT GCTTTCCCGT
ATCTCCCTTT TCCGGCTGGG CTTTGATCCC GCCTCCTGCA AGAAATGCGG CAAATGCGTC
AAATCCTGCA AGGCGCAATG CCTGAACCTG AAGGAATACA AAATAGACTC CTCACGCTGC
GTGGCGTGCT ACGATTGCGT GCGCTCCTGC AGTGAGGGGG GAATACGCTA CCGCTGGTTT
ACCAGGGCCC GTCAACTGGT TCCGGCCCAA AAAAAGAAGG CTTCCCCGGA TACCGCCCTC
TCTTCTTCCG CCGCAGTTCC CTCCATTGCC GGGAGTTCCC GCCGCCAGTT CCTGGAGGCT
ACTGCGGCCG GGCTGGCTAC GGCCGCCCTT TCCGGATGCC GGGGAGATGC CGCCCGGAAG
CTGGACCCCA CCCAGTGCGT TCTTCCTCCC GGAGCCGGTT CCCTGGAACG TTTTCTGGAT
ATCTGCACCG GCTGCCAGAT GTGCGTTGCC AACTGCCCCA CCCATGTGCT TCAGCCTTCA
TACCTGCAGC TTGGCCTGAA GGGATTCATG AAACCCCGGA TGGATTTTGC CACCAAATAC
TGCCTTTATG ATTGCCACCG GTGTGCGGAA GTCTGCCCCA CGGGGGCCAT ACGCAGGATG
CCTGTTACCG CGGAAAGGGA TACTGAGGGA ATAACAAAAG ATACTACGCG CATTGCCGTG
GCCCGGTTTT ACGTCTGCCG CTGCCTGGTT GCCCGGGAGG ACATGGATTG CGGAGCCTGT
ACGGAGCATT GCCCCACCAA GGCCCTTTAC ACGGTGCCCT ATATCGGGCG TGACGGCCAG
GAGCACCGCC TGCCCAGGCT GGATCCTTCC CTGTGCATCG GCTGCGGCGC GTGCGAACAC
GCCTGTCCCG TTACCGCGGA ACGGCCTGAG GAACGCGAAC GCCGGAACTC CTGCGATTTG
TGCGAGGAAA AATGCGAGTT CGGAAGGCGG CGGGAAATGC CCCCCCGGGC GTTGGTGGTC
CGTGCCGTAA ATCCCCAGCA GAAAGCTGTT AAAAAGTTTG AGGACAAAGC TGTGGATCCG
GTGGGGGATG CGGATTTTCC GTTTTGA
 
Protein sequence
MINMSVIKAF LVSPLKWLRV TVAVIFFIGI AYAFLHHIPA WNVPNMTGGG EGMEDSFSLA 
RWQFVPSVLG TLSGAAVSAV ILGVLLLLTL LFGRVYCSFI CPLGILQDIV FRIRRWLAPK
RFLKFSRPVP WVRYGVLALL AACCVTGLAG LSLNWLDPYS IFGRIMYVLA WPAAIWSNNL
LAADSSSADL VQMDYFPAAF PVLLASAGML GLVAVMSAWK GRLYCNTVCP VGTLLGLLSR
ISLFRLGFDP ASCKKCGKCV KSCKAQCLNL KEYKIDSSRC VACYDCVRSC SEGGIRYRWF
TRARQLVPAQ KKKASPDTAL SSSAAVPSIA GSSRRQFLEA TAAGLATAAL SGCRGDAARK
LDPTQCVLPP GAGSLERFLD ICTGCQMCVA NCPTHVLQPS YLQLGLKGFM KPRMDFATKY
CLYDCHRCAE VCPTGAIRRM PVTAERDTEG ITKDTTRIAV ARFYVCRCLV AREDMDCGAC
TEHCPTKALY TVPYIGRDGQ EHRLPRLDPS LCIGCGACEH ACPVTAERPE ERERRNSCDL
CEEKCEFGRR REMPPRALVV RAVNPQQKAV KKFEDKAVDP VGDADFPF