Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0962 |
Symbol | |
ID | 6274198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1146758 |
End bp | 1148524 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642613016 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_001877575 |
Protein GI | 187735463 |
COG category | [C] Energy production and conversion |
COG ID | [COG0348] Polyferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATA TGTCAGTTAT CAAAGCCTTT CTCGTCAGTC CTCTGAAGTG GCTCCGCGTG ACGGTGGCCG TCATTTTCTT TATTGGGATT GCATACGCTT TTCTGCACCA CATTCCCGCG TGGAACGTGC CGAACATGAC GGGGGGCGGA GAGGGGATGG AAGATTCCTT TTCCCTGGCG CGGTGGCAAT TTGTGCCGTC CGTGCTGGGG ACCCTGAGCG GGGCAGCCGT TTCCGCCGTG ATTCTGGGGG TTTTGCTGCT GCTTACGCTG CTGTTCGGCC GCGTATACTG TTCCTTCATC TGCCCGCTGG GGATTCTCCA GGATATTGTC TTCAGAATCC GCCGCTGGCT GGCGCCGAAG CGTTTCCTGA AATTCTCCCG GCCTGTGCCG TGGGTGCGGT ATGGGGTGCT GGCATTGCTG GCCGCCTGCT GCGTGACGGG GCTGGCCGGT CTGTCTCTGA ATTGGCTGGA CCCTTACAGC ATTTTCGGGC GCATCATGTA TGTGCTGGCA TGGCCGGCCG CCATTTGGAG CAATAACCTG CTGGCGGCGG ACAGTTCTTC TGCGGACCTG GTCCAGATGG ATTATTTCCC CGCGGCTTTC CCGGTTCTGC TGGCTTCCGC CGGCATGCTC GGCCTGGTGG CCGTCATGAG TGCCTGGAAG GGGCGCCTGT ATTGCAATAC GGTATGCCCC GTCGGCACGC TGCTTGGCCT GCTTTCCCGT ATCTCCCTTT TCCGGCTGGG CTTTGATCCC GCCTCCTGCA AGAAATGCGG CAAATGCGTC AAATCCTGCA AGGCGCAATG CCTGAACCTG AAGGAATACA AAATAGACTC CTCACGCTGC GTGGCGTGCT ACGATTGCGT GCGCTCCTGC AGTGAGGGGG GAATACGCTA CCGCTGGTTT ACCAGGGCCC GTCAACTGGT TCCGGCCCAA AAAAAGAAGG CTTCCCCGGA TACCGCCCTC TCTTCTTCCG CCGCAGTTCC CTCCATTGCC GGGAGTTCCC GCCGCCAGTT CCTGGAGGCT ACTGCGGCCG GGCTGGCTAC GGCCGCCCTT TCCGGATGCC GGGGAGATGC CGCCCGGAAG CTGGACCCCA CCCAGTGCGT TCTTCCTCCC GGAGCCGGTT CCCTGGAACG TTTTCTGGAT ATCTGCACCG GCTGCCAGAT GTGCGTTGCC AACTGCCCCA CCCATGTGCT TCAGCCTTCA TACCTGCAGC TTGGCCTGAA GGGATTCATG AAACCCCGGA TGGATTTTGC CACCAAATAC TGCCTTTATG ATTGCCACCG GTGTGCGGAA GTCTGCCCCA CGGGGGCCAT ACGCAGGATG CCTGTTACCG CGGAAAGGGA TACTGAGGGA ATAACAAAAG ATACTACGCG CATTGCCGTG GCCCGGTTTT ACGTCTGCCG CTGCCTGGTT GCCCGGGAGG ACATGGATTG CGGAGCCTGT ACGGAGCATT GCCCCACCAA GGCCCTTTAC ACGGTGCCCT ATATCGGGCG TGACGGCCAG GAGCACCGCC TGCCCAGGCT GGATCCTTCC CTGTGCATCG GCTGCGGCGC GTGCGAACAC GCCTGTCCCG TTACCGCGGA ACGGCCTGAG GAACGCGAAC GCCGGAACTC CTGCGATTTG TGCGAGGAAA AATGCGAGTT CGGAAGGCGG CGGGAAATGC CCCCCCGGGC GTTGGTGGTC CGTGCCGTAA ATCCCCAGCA GAAAGCTGTT AAAAAGTTTG AGGACAAAGC TGTGGATCCG GTGGGGGATG CGGATTTTCC GTTTTGA
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Protein sequence | MINMSVIKAF LVSPLKWLRV TVAVIFFIGI AYAFLHHIPA WNVPNMTGGG EGMEDSFSLA RWQFVPSVLG TLSGAAVSAV ILGVLLLLTL LFGRVYCSFI CPLGILQDIV FRIRRWLAPK RFLKFSRPVP WVRYGVLALL AACCVTGLAG LSLNWLDPYS IFGRIMYVLA WPAAIWSNNL LAADSSSADL VQMDYFPAAF PVLLASAGML GLVAVMSAWK GRLYCNTVCP VGTLLGLLSR ISLFRLGFDP ASCKKCGKCV KSCKAQCLNL KEYKIDSSRC VACYDCVRSC SEGGIRYRWF TRARQLVPAQ KKKASPDTAL SSSAAVPSIA GSSRRQFLEA TAAGLATAAL SGCRGDAARK LDPTQCVLPP GAGSLERFLD ICTGCQMCVA NCPTHVLQPS YLQLGLKGFM KPRMDFATKY CLYDCHRCAE VCPTGAIRRM PVTAERDTEG ITKDTTRIAV ARFYVCRCLV AREDMDCGAC TEHCPTKALY TVPYIGRDGQ EHRLPRLDPS LCIGCGACEH ACPVTAERPE ERERRNSCDL CEEKCEFGRR REMPPRALVV RAVNPQQKAV KKFEDKAVDP VGDADFPF
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