Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0946 |
Symbol | |
ID | 6274218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1127105 |
End bp | 1127668 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642613000 |
Product | DJ-1 family protein |
Protein accession | YP_001877559 |
Protein GI | 187735447 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family [TIGR01383] DJ-1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.892246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TCGCCATACT TGCCGCCCCC GGATTTGAAG AAATCGAACT CATGGCTCCG CTGGACATCC TGCGGCGCCT GAACATGGAC GTAGTGCTTG CCGGCGTCCA GTCCGACAAG GTGGTCAGCA CCCATGAAGT AACCGTCAGC ACGGACACCA TGCTGGATAA ACTCCATGCT GACAAGCTGG ACGCCCTGAT CCTGCCCGGC GGCGCGGGCT CCTGGGTACT CCGCGACACG CCGGAAGTCA TCCATCTGGT CAAAAAAATG CATGAAGCGG GCAAGCTGGT GGCCGCCATC TGCGCCGCCC CCATCGTGCT GGCCAAAGCG GGCCTGGTCA GGGACAGGAA CGTCACGGCC TACCCGGCCC AGGACGTTTA CCGGGAACTC AACGAAGCCG GCGCCCATAT TGTGAAAGAT GAAAATGTGG TGCTGGACGG CAACATGCTC ACCGCCAACG GCCCCGGCGC CGCCATGCTC TTCGGCTACT CCATCGGGGA ATATCTGGGG GAAGACCTCC AGGTGGCCCA GCTCAAAGAG CAGATGTGCT ACACGGGCCT GTAG
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Protein sequence | MKKVAILAAP GFEEIELMAP LDILRRLNMD VVLAGVQSDK VVSTHEVTVS TDTMLDKLHA DKLDALILPG GAGSWVLRDT PEVIHLVKKM HEAGKLVAAI CAAPIVLAKA GLVRDRNVTA YPAQDVYREL NEAGAHIVKD ENVVLDGNML TANGPGAAML FGYSIGEYLG EDLQVAQLKE QMCYTGL
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