Gene Amuc_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0946 
Symbol 
ID6274218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1127105 
End bp1127668 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content61% 
IMG OID642613000 
ProductDJ-1 family protein 
Protein accessionYP_001877559 
Protein GI187735447 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family
[TIGR01383] DJ-1 family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.892246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TCGCCATACT TGCCGCCCCC GGATTTGAAG AAATCGAACT CATGGCTCCG 
CTGGACATCC TGCGGCGCCT GAACATGGAC GTAGTGCTTG CCGGCGTCCA GTCCGACAAG
GTGGTCAGCA CCCATGAAGT AACCGTCAGC ACGGACACCA TGCTGGATAA ACTCCATGCT
GACAAGCTGG ACGCCCTGAT CCTGCCCGGC GGCGCGGGCT CCTGGGTACT CCGCGACACG
CCGGAAGTCA TCCATCTGGT CAAAAAAATG CATGAAGCGG GCAAGCTGGT GGCCGCCATC
TGCGCCGCCC CCATCGTGCT GGCCAAAGCG GGCCTGGTCA GGGACAGGAA CGTCACGGCC
TACCCGGCCC AGGACGTTTA CCGGGAACTC AACGAAGCCG GCGCCCATAT TGTGAAAGAT
GAAAATGTGG TGCTGGACGG CAACATGCTC ACCGCCAACG GCCCCGGCGC CGCCATGCTC
TTCGGCTACT CCATCGGGGA ATATCTGGGG GAAGACCTCC AGGTGGCCCA GCTCAAAGAG
CAGATGTGCT ACACGGGCCT GTAG
 
Protein sequence
MKKVAILAAP GFEEIELMAP LDILRRLNMD VVLAGVQSDK VVSTHEVTVS TDTMLDKLHA 
DKLDALILPG GAGSWVLRDT PEVIHLVKKM HEAGKLVAAI CAAPIVLAKA GLVRDRNVTA
YPAQDVYREL NEAGAHIVKD ENVVLDGNML TANGPGAAML FGYSIGEYLG EDLQVAQLKE
QMCYTGL