Gene Amuc_0927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0927 
Symbol 
ID6274238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1107795 
End bp1108196 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID642612981 
Productribosomal protein S8 
Protein accessionYP_001877540 
Protein GI187735428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000726812 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAT TAAGTGATCC CATTTCCGAC TTCCTCACCC GCCTGAAAAA CGCCAGCCTG 
GCCGGCAACG AGGAATTTAC CGCTCCCTGC TCCAACATCA AGGTGGAAAT CGCCCGGATT
CTGCAGGAAG AAGGCTACAT CTGGAACTAT GAAGTGACCG GAGAAGGCTC CAAGAAGCAA
ATCAAGGTGA AGATCAAGTT TACCCCGCAG GGCAAGCCGG TCGTTACCGA TGTGAAGCGC
AGCTCCAAGC CGGGCCGCCG TCAGTACGTT TCTTCCGAGG ACATTCCCCG CGTTCTCAGC
GGGCTTGGCA TTGCCATCGT CTCCACCTCC CGCGGTGTGA TGACCGGTGC GCAGGCGCGC
AAGCAGAGCA TCGGCGGCGA ACTTCTCGCC CTTGTATGGT AA
 
Protein sequence
MAVLSDPISD FLTRLKNASL AGNEEFTAPC SNIKVEIARI LQEEGYIWNY EVTGEGSKKQ 
IKVKIKFTPQ GKPVVTDVKR SSKPGRRQYV SSEDIPRVLS GLGIAIVSTS RGVMTGAQAR
KQSIGGELLA LVW