| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0920 |
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| Symbol | |
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| ID | 6274245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1099438 |
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| End bp | 1100859 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612974 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_001877533 |
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| Protein GI | 187735421 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.746532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.6877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTT TCTCATCACG CAGACAATTT CTCAAATCTT TGGGGCTTGC GGCCGGAGCG
GCTGCCGCCG GAAATGCCCT CCCTGGGAAG GCTGTGGAAA TCCCTGCCGG AGACCATCTC
TGGAAATCCG CCTCTCCGGC GGCTCCGAGG CCTTCCGGTT CCACATACAT GGGAGGGTTC
AAGGCTCCCC GGCTGGGTCG CATCAGGCTG GCCTTCATCG GCGTGGGAGG GCGCGGGTTC
TCCCACCTGG CGCAAATGTG CGTGATGGAT GGAGTGGAAA TCGTGGGCAT ATGTGATTTG
AAGGAAGAGT TGACGAAACG CGGCGTGGAT CGCGTGCTCT CCAGAATGGG GAAAAGCCCT
TTGGGCTATT CCGGCGGCGA TATGGAATAC CTGACCATGC TGAAGGAGCT GAAGCCGGAT
GCCGTCATCA TCAGTACGGA TTGGAGTTCG CATGCCAGAA TCGCCTGCGA CAGCATGAAG
CACGGCGCTC ACGCCTTTGT GGAAGTTCCT CTGGCCGTCT CTCTGGAGGA GCTCTGGAGC
CTGGTGGATA CCAGCGAGGC CACCAGGAAA CATTGCATGA TGATGGAAAA CGTCAACTAT
GGGCGGGATG AACTCATGTT CCTGAACATG GTCCGGCAGG GCGTCATCGG CGATTTGCTT
CACGGGGAGG CCGCGTATAT CCATTGCCTG GTGACGCAGC TGGGGGACAC GCGCGGGGAA
GGGGCCTGGC GGCCGGAATA TCATACCAGA ATCAATGGCA ACCTGTACCC CACCCACGGG
TTGGGGCCGG TGGCTCAATA TATGAATTTG GAGCGTGGAG AGGACCGTTT CTGCCGTGTG
GCGGCGTTCG CTTCTCCTGC TCTCGGGCGC AATGCCTACG CTAAAAAGCA TCTTCCCGCC
GATCACCGCT GGAACAATAC TCCATTCATC TGCGGTGACA TGAATACGGC TGTTGTCAAG
ACGCAGCTGG GGCGGACCAT TCTTGTCCAG CTGGATGAGA CGTCCCCCCG GCCTTACTCC
CGCGCCAACC TGATCCAGGG AACGGAGGGC ACGCTGGCTG GTTTCCCAAC CCGCGTGGCG
GGTGAAAAGC TGGGCAACGG CAATTATCAT GAATGGATTG AAGGCAGGGA AAAACTGGCC
GCTATTTATG AAAAATACGA TCATCCCCTC TGGAAACGCA TCGGGGAGCT GGCCACGAAA
ATGGGCGGTC ACGGCGGTAT GGACTTTGTG ATGCTTTCCC GCATCGTGGA ATGCCTCCGG
AACGGAGAAC CAATGGATCA GAACGTTTAC GAAGGAGCTT CCTGGTCTTC CCTGCTGCCG
TTGACAGCCC GTTCCATCGC CCAGGGCGGG ATGCCTGTGG AATTTCCGGA TTTTACCCGC
GGAGACTGGA AAACCACCAT GCCGCTGGCC GTGGTTTCAT GA
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| Protein sequence | MSIFSSRRQF LKSLGLAAGA AAAGNALPGK AVEIPAGDHL WKSASPAAPR PSGSTYMGGF
KAPRLGRIRL AFIGVGGRGF SHLAQMCVMD GVEIVGICDL KEELTKRGVD RVLSRMGKSP
LGYSGGDMEY LTMLKELKPD AVIISTDWSS HARIACDSMK HGAHAFVEVP LAVSLEELWS
LVDTSEATRK HCMMMENVNY GRDELMFLNM VRQGVIGDLL HGEAAYIHCL VTQLGDTRGE
GAWRPEYHTR INGNLYPTHG LGPVAQYMNL ERGEDRFCRV AAFASPALGR NAYAKKHLPA
DHRWNNTPFI CGDMNTAVVK TQLGRTILVQ LDETSPRPYS RANLIQGTEG TLAGFPTRVA
GEKLGNGNYH EWIEGREKLA AIYEKYDHPL WKRIGELATK MGGHGGMDFV MLSRIVECLR
NGEPMDQNVY EGASWSSLLP LTARSIAQGG MPVEFPDFTR GDWKTTMPLA VVS
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