Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0917 |
Symbol | |
ID | 6274250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1094295 |
End bp | 1096802 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642612971 |
Product | peptidase U32 |
Protein accession | YP_001877530 |
Protein GI | 187735418 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTCCG ACGACATAAC CCTTTCCGCC CTCCGGCCCG GAGACCTGCG CCCCGAACTG CTGGCCCCCG CCGGGGACAT GGACTGCGCC CGCGCCGCCG TAGCCAATGG CGCAGACGCC ATTTATTTCG GCCTGGACCG TTTCAACGCC CGTCTGCGCG CAGACAACTT CACGCTGGAT TCCCTTCCGG AACTGATGCG TTTCCTTCAC GCACACGGCG TGAAGGGGTA CGTGACCATG AATACGCTCA TTTTTACCTC CGAACTGGCG GACGCCCTCT CCTACCTGGG CCACCTGAAT GCCGCCGGCG CGGACGGGGT CATCGTGCAG GACATCGGTC TTGCCCACTG CCTGACGGAA TGGGGAAGGC AGGTTCCCGG CATGAAGCTG GAACTGCACG CCTCCACCCA GATGACACTT TCCTCCCCGG ACGGGTTGGA ATTCGCCTCC GGATTCCTGG ACCTGAAGCA GGCCGTCCTG GCCCGGGAAC TGAGCCTGAA GGAAATCGGG CAATGTGTAC GGCATACGGA CATTCCCCTG GAAGTATTTG TACACGGAGC GCTCTGCGTG GCCTATTCCG GCCAGTGCCT TACATCGGAA AGCCTGGGAC AGCGCAGCGC CAACAGGGGA GAATGCGCGC AGGCCTGCCG CCTGCCCTAC TCCCTGGTTG TAGACGGCAA AACCGTTCCT CTGGGAGAAC GGCGCTACCT GCTCAGCCCG CAGGACCTGT GCGCCCTTGA CCGCATCCCG GACCTGGTCC GCATGGGCGT GAAAAGCTAC AAGATAGAGG GACGTCTGAA AAGCCCGGAA TACGTTGCGG CGGTAACGGC GGCCTATAGA AAAGCTCTGG ACGCCGCCTG CGCTGGAATA CTTGTGGATG AAATGGTGAC CGCACGCGAC CGTTATGCAC TGCAAATGGT ATTTTCACGC GGCTTCTCCA CCGGCTGGCT GGACGGGACG GACCACCCGC GTCTGACCCA CGGCCGCTAC GGTAAAAAGA GGGGCGCCTA CGCAGGCGTC ATTATGAACA GCGGTCAGGG CTGGCTGGAT ATCAGGCCGG AAGGGGGCAT TCCGCTCGCG CCCGGGGACG GCTTCGTCAT TGATGCAGGG GAAGACCGCA ATGAAGAACA GGGCGGACGT ATCTGGAAAG TGCAGAGAAA CCGCCTTTTC TTCCACGGAA AGGCATCCCG TATTGACTGG AGCAGGGTTA AACCCGGGCA AAAACTCTGG AAAACGGATG ATCCGGCCCT GAACGCGGAG TTGAAAAAAA TGCGGGAACA CTTGCAGGAA TCCACCATTC CCCTCCATCT GACATGTGCC GGGTCCGTCG GGAACCCCCT GACGATTGCC TGTCCGGAAT ACGGATGTTC CGTGCAATCT CCCCAGCCCC TTCAGACGGC AGAAAAACGC CCTCTGACTC CCGAAGTGCT GAAACAACAG CTCGGCAGGC TGGGGGGAAC GGGATTCCGC CTGGCCTCCT GCGACTGCCC TCTGCCGGAG GGCCTGATGC TTCCGCTCAG CATCCTCAAC CAGACAAGGC GTGCCCTGGT GGAACGAATT CAAACGGCCC GGGAGGCAAA AGAATCCTCC GTTCCCTCTC ATCCTCCGGC CTCCTTCACC CTTCCTCCGC TGCCGAAGGG AACAGCCGTT CCGGACATGC CTCCCCATTT GTCTGTTCTG TGCCGCAAAA CGGAGCAAAT ACCCGCCGCG CTGGATGCCG GAGCGAATGC CGTTTATCTG GACTTTGAAG ACCTCCGGGA CTATGCGGAA GGCATAAAAA CCGTCCGGGA ACACGGAAAA AGCATTCCCG TCTTCCTGGC GACGCCCCGC ATCCAGAAAC CCTCGGAAGT CGGATACTTC AAACTTATGG AACGGGCGGA ACCTGACGGC ATCCTTATTC GCAACCTGGG TGCGGCGCAA TATTTCCGCC AGTCCCTCCT GCATCGCATC GGAGATTTTT CCCTGAACGT CGCCAATCCA TACAGCGCGG CTATCCTGAA GAAACAGGGG AATCTGGCCC ATCTCACCAT CTCTTACGAC CTGAACGCGG AACAGGTGGC GGACCTGCTC CGCGCCGCGC CGCCGGAATG GTTTGAACTG ACGCTGCACC AGCACATGCC CATGTTTCAT ATGGAGCATT GCGTGTTCTG CACCTTCCTG TCGAACGGCA CCAGTTATAA GAACTGCGGC CGCCCCTGCG AACGGCATCA TGTGCAGCTG CGTGACCGCG TAGGACAGCT TCATCCCCTG CTGGCGGACG CCGGGTGCCG GAACACGCTG TTCAACGGAC GCGCCCAGAC GGGAGCCGGC TTCCTCCAGG ACTTCCGCCG TCTGGGCCTT TCCCGTTTCC GGCTGGAACT GCTGGATGAT CCCCCGGAAA AAGTGCGCCT TCTGGTGTCC CGCTACCGGG AGCTGCTGGA CGGTTCCTGC ACTGCGGCCC GGCTTATCCG GGAATTGGAC GTCGCAGAAC AGCTCGGCAC TACGGAGGGG ACGCTCCGGC CGGGATAA
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Protein sequence | MISDDITLSA LRPGDLRPEL LAPAGDMDCA RAAVANGADA IYFGLDRFNA RLRADNFTLD SLPELMRFLH AHGVKGYVTM NTLIFTSELA DALSYLGHLN AAGADGVIVQ DIGLAHCLTE WGRQVPGMKL ELHASTQMTL SSPDGLEFAS GFLDLKQAVL ARELSLKEIG QCVRHTDIPL EVFVHGALCV AYSGQCLTSE SLGQRSANRG ECAQACRLPY SLVVDGKTVP LGERRYLLSP QDLCALDRIP DLVRMGVKSY KIEGRLKSPE YVAAVTAAYR KALDAACAGI LVDEMVTARD RYALQMVFSR GFSTGWLDGT DHPRLTHGRY GKKRGAYAGV IMNSGQGWLD IRPEGGIPLA PGDGFVIDAG EDRNEEQGGR IWKVQRNRLF FHGKASRIDW SRVKPGQKLW KTDDPALNAE LKKMREHLQE STIPLHLTCA GSVGNPLTIA CPEYGCSVQS PQPLQTAEKR PLTPEVLKQQ LGRLGGTGFR LASCDCPLPE GLMLPLSILN QTRRALVERI QTAREAKESS VPSHPPASFT LPPLPKGTAV PDMPPHLSVL CRKTEQIPAA LDAGANAVYL DFEDLRDYAE GIKTVREHGK SIPVFLATPR IQKPSEVGYF KLMERAEPDG ILIRNLGAAQ YFRQSLLHRI GDFSLNVANP YSAAILKKQG NLAHLTISYD LNAEQVADLL RAAPPEWFEL TLHQHMPMFH MEHCVFCTFL SNGTSYKNCG RPCERHHVQL RDRVGQLHPL LADAGCRNTL FNGRAQTGAG FLQDFRRLGL SRFRLELLDD PPEKVRLLVS RYRELLDGSC TAARLIRELD VAEQLGTTEG TLRPG
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