Gene Amuc_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0908 
Symbol 
ID6274259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1083348 
End bp1085591 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content48% 
IMG OID642612962 
Producthypothetical protein 
Protein accessionYP_001877521 
Protein GI187735409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG ATTCCATTTT TCTTTCCATT TTTTTATTTT TCCTTTTTCT GACAATCTCC 
GTAAATAAAT CCCTCGCGGA AAAATATCCT TCGCTGGATG TTCCGGAAGA CATTTTGCTC
CACGTGAAAG AAGCTGCTTC CTCCCAGTCC CCCTATTCCG GCAATCATTC CGTAAAGCAG
GCTGTGGACG GCTCTATGGA ATCCGCCAAC TGGCATGTTC CCGGAGTGCA TCATGTGGAG
GGGGAATTTG TGTTTGAAGT GCCGGAGACC ATTCATTACA TCATTTTTTC CGGAGCCAAT
TTCAATGAAA TTGCCGTGTC CGCCATGTCC GGCTCGTCTT GGAAGGACCT TGGAAAATTC
GATATCGGCG GCTCCAGGAT GATCAGATTT AAAAAGCCTC TTCAAAAGGT TCGGAAAATC
AGGTTGACGG TTGATTATCC CGAAGGTTCC TCTCCGTCTT TTACCGTACG GGAAATCAGC
TTTTACAAAA GGGTGGAGTC CGCACTTAAC CGGAAATTGC TGAAAGTATT TAAGGACACG
AGCTGCTCCT CCATCAACCC CAGGTGTACC CTGACGGACC TCAAGGCTCT TCCGGAGTTT
TTACAGATGA TTGCGAAGAA AATAAAATCC GGCGATTATG AAGACAAAGA ATTCCGCATT
GCTTCCTATA AGGCTTACAG CCATCCGGAG TTTGCTGCGA AGGTGAGAAA TATCAACGCC
CTGAACAAAT TTGACAATCC TACCGGAATT GTCGCGGAGA AAGGAGATGA AATTCTTGTG
TTCGTAGGAC CTACCCATGG AGAAGATATT GGGCTGGCCT CCGTTTCTCC AGCGGGAATA
GAGTCTTCCT CCTATCCTTT GAATGAAGGG GTAAACAAAA TTAGAATCAA CCGTTCGGGA
TTGCTTTACG TGATGTATCA CACCGATATC AGCCCGCCCA AGAAGCCGAT AACGGTGCAT
ATTCCTGTGG GAAGCGGCAT AGTGAATGGA TATTTTGACG TGACGAGGCA CACGGATAAG
GACTGGAAGC GTATGATCAG CAACGCCCCG CATAGCATGT TCGATATCGT TGGGCGGAAT
TCCATGATGA TTCTTCACAC AAAGTACCTG AAAGATTACA GTCCGGATTC CATTACGAAA
TCCGTCAGGG TATGGGATGA AAGCGTCAAG GCCATGTGGA AAATCATGGG ATTTGACAAG
TATCCCCAGC CGCACAATAA CCGGCAGCTT GGCGTTTCCG TAGAAGGAGG AGCCCATATG
TTTGCAACCT GGTATTACTG CGGCTACAGT ATTGGAGATC AGGGAAATAC GCTGAAAAAT
GAAGTGCTCG CTCCTGGAGT TCTTCAGGGA AACCGCCTTT GGGGAATCGG GCATGAAATC
GGTCATTGCT ACCAGCATCC GTTCAACTGG CGCAGCATGT CGGAAAGTTC CAACAATTTT
TTTGCCCAGC TGATTCTGGA CCAGGTGACC AATGCCATTA ATGGCAATGA GCAGGCCTCC
GATATGGAAA ACCCGTGCAA ATACCTGCTT TCAGAAGCGG TAAAGGGCAT GCCGTTCCAT
GATTTGAACG GCTGGGCCAA ATGGGGTTTT GCTCAATATT CCTTCTATCT GTATTTCCAT
AAGCTGGGAA TCAATCCCGA ATTTTATCCT AGGCTGTTTG AATCATTGCG GCGCAAGCCG
CTTTCCAGGC AGGCGTATGA GGTTTCCGAA GCCCATTTGG CCTTGTATGA ACGCATTTGC
AATATCAGCA GGACGGACTT TACCGATGAC TTTGAAATTT TTAATTGGTT TGTCCCGATT
GACCGCAAGG GGCATCAATA TGGGGATTAC AGTTTTAAAA TGACAGAGGA AATGGCCCGG
GCATCCAAGG CCCGCATTGC CGCCAAACGG TACCCCAAAC CGAAATTCCG CATTGCCTTC
CTGCATCAGC ATGGAAAGAC GGTCAATTTG TGGGGGCAGA ATCTGCATGG GTCCCAGCTC
AACGGCTATT GGACCAAATA CAAGCAGAAC GCAAAACTCA GCCCGTCTGT AAGCGCCTCC
AAAAAGGATA ACATGATTAT TGTGCGGAAT GGGGAAAATG CAGCCGCTTT CTGTGTAGTG
ACCAATGGAA AGGTGGTAGG TTATTATGAC CGTCAGAAGT TTGACGTTTC CGGCGTGGAA
TGGAATGATA CCTCTAAAGT GTACGCCATC CCGATTCAGA CGGCGGAACC TTATAAGTTG
ATTTATGCTG CCGGGCGTTC CTGA
 
Protein sequence
MRKDSIFLSI FLFFLFLTIS VNKSLAEKYP SLDVPEDILL HVKEAASSQS PYSGNHSVKQ 
AVDGSMESAN WHVPGVHHVE GEFVFEVPET IHYIIFSGAN FNEIAVSAMS GSSWKDLGKF
DIGGSRMIRF KKPLQKVRKI RLTVDYPEGS SPSFTVREIS FYKRVESALN RKLLKVFKDT
SCSSINPRCT LTDLKALPEF LQMIAKKIKS GDYEDKEFRI ASYKAYSHPE FAAKVRNINA
LNKFDNPTGI VAEKGDEILV FVGPTHGEDI GLASVSPAGI ESSSYPLNEG VNKIRINRSG
LLYVMYHTDI SPPKKPITVH IPVGSGIVNG YFDVTRHTDK DWKRMISNAP HSMFDIVGRN
SMMILHTKYL KDYSPDSITK SVRVWDESVK AMWKIMGFDK YPQPHNNRQL GVSVEGGAHM
FATWYYCGYS IGDQGNTLKN EVLAPGVLQG NRLWGIGHEI GHCYQHPFNW RSMSESSNNF
FAQLILDQVT NAINGNEQAS DMENPCKYLL SEAVKGMPFH DLNGWAKWGF AQYSFYLYFH
KLGINPEFYP RLFESLRRKP LSRQAYEVSE AHLALYERIC NISRTDFTDD FEIFNWFVPI
DRKGHQYGDY SFKMTEEMAR ASKARIAAKR YPKPKFRIAF LHQHGKTVNL WGQNLHGSQL
NGYWTKYKQN AKLSPSVSAS KKDNMIIVRN GENAAAFCVV TNGKVVGYYD RQKFDVSGVE
WNDTSKVYAI PIQTAEPYKL IYAAGRS