| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0898 |
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| Symbol | |
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| ID | 6274269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1070694 |
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| End bp | 1073303 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612953 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001877512 |
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| Protein GI | 187735400 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA CGTTAATTAT AGCAGAAAAG CCGAGCGTCG CCACTGATTT GGCGAGAGTG
CTCGGCAAAG AGCTTGGAAA ATTCACCCGG GACAAGTCCG GGGCATTTTA CCAGAATGAC
CGGGCCATCA TCACCTCTGC CGTAGGCCAT CTGCTGGAAC AGAAAAAACC CATGACGGAA
GAAGGAAAGT CCCTGCCGTG GAAATTCGAC TATCTGCCCG TCATCCCCAG GAAGTTTGAA
CTGGAACCCA TCAAGCAGTC GGAAGACCGT TTGAAAAAGG TTCTTCAGCT TGCCAGGAGC
AAGGACGTCA CGGAAATCGT CAACGCATGC GATGCCGGGC GTGAAGGGGA ACTGATCTTT
CACAATCTGG CGCGTTACGG AAAATGGACC AAGCCTACGC GGCGCTTATG GATGCAGTCC
ATGACAGATG AGGCCATCCT CAACGCATGG CATGGCATGC GCAGCGAAGC TGACATGAAG
CCCCTGACGA ATGCCGCCGT GTGCCGTTCC GAATCAGACT GGCTGGTGGG GCTGAACAGC
ACCCGCGCCT TGACGATCCT GCAATCCCGC GGCGGCTTCA ACGTCACCCC CGCCGGGCGC
GTGCAGACGC CCACGCTGGC TATTCTGACG CAGAGGGAAT TGGAAATCCA GGCGTTTGAA
CCGGAGCCCT ATTCGGAAGT ATGGGCCGAA TTCGACGTTC AGTCCGGCTC TTACTCCGGC
CGCTGGATTG ACCGTGACTG GAAGAAAAAC GATCATCCCC ACTCCCGCGC GGAGCGCATC
TGGGATCCGG AACAGGCGGC CGTCATCCGC GACCGCTGCC GCGGCAAAGC CGGCACGGTG
ACGGAAGAAA AGAAACCGGT CACGACGGTC GCCCCGCTGT TGTATGACCT GACTTCCCTT
CAGCGGGAAG CCGCCAACCG CTACGGTTTT TCCGCCAAGC GCACGCTGCA GCTGGCCCAG
GAATGCTATG AAAAGCACAA GGTGCTCACT TATCCGCGTA CGGACTCCCG CTACCTGCCG
GAAGATTATC TGGGCAAGGT TTACGGCATC GTAGGCACGG TGGCGGAGCA GAACCCGGAA
TTCGCCCCCT TTGCCAGGGA CATTCTGGAC AACAAGCGCA TCAAGCCCAA CCGGCGCGTG
TTTGATACAA AAAAGGTGAG CGACCACTTT GCCATCATCC CGACCGGGAA GATGGAGAAG
CTTACCGGGG ACGCGCAGAA ACTCTTTGAA ATGGTCATGG CCCGTTTCCT GGCCGTCTTC
TTCCCCGCTG CCGTGTTTGA AGACACGCGG AGAACCACGC TCATTACCCA CCAGGACGGC
GTGACGGACG CTTTCCTGAC CACGGGCCGG GTGCTTGTGG AGCCGGGCTG GCAGGCCGTT
TACGGACGGA AGGCCGGCAC TTCCTCCAAG GAGGAGCTGG TGCCCGTCCG CGACGGGGAG
CAGGCCGCCT TGCGTGAGAT TGAAATCCGC AACGCCATGA CCAAGCCGCC CGCCCGGTAC
AACGAAGCCA CGCTGCTGGC TGCCATGGAG GGGGCAGGAA AACTGGTGCA TGACGAAGAA
CTGGCCGCCG CCATGAGCGA ACGCGGCCTG GGCACTCCCG CCACCCGCGC CTCCATCATT
GAAGGGCTGA TTTCCCAGGA ATACATCGTC CGGGACGGCC GCGAACTTCT GGCGACGCGC
CGCGGGATTG AACTGATTGC CCTGCTGGAA CGCATCGGCC TGAAAACGCT CACCTCCCCC
AGCCTGACTG GGGAATGGGA ATACAAGCTC AAGCAGATGG AACAGGCCGC CCTGCCGAGG
GATTCCTTCA TGGAGGGCAT TAAGACCCTG ACCGGGGAAA TCGTGAAGAG GGTGAAGGAT
TTCCGGGAAG CCCAGCAGCA GGTGGAACTG CCGGAAATGG AATTGGACTG CCCTTCCTGC
CATGCCCACG GCCTGAAAAA CACGCTGGAC GCCGTTTCCT GCCGTTCCTG CAAGTTCAGC
ATCCGCAAAG TTATCTCCGG CCGCGACATG GCGGATGAAG AATTGAAGAC CCTTATTGTG
GACGGCAGGA CGGGAATTCT CCACGGATTT ACCTCCCGGT TCGGCAAGCC CTTTGAGGCG
GGGCTGGAAC TCAACGACAA ATTCCGGGCC ACGCTTTACT TCCCGGCGCG GGAGGAAGAT
GAAGCCGCAG GGGTGGAGGA AGCCGTGAAA GTGGCTTCCG TCGCCATTCC GGACATGGGA
GAGCATGATG TGATGGAAAC GGCCAAGGCC TGGAAAATTC CTTCCCTGAC CCTTGGAAAG
GAACATGCCG CCGTCTCCGT TTCCCGGACT ATCCTGGGAC GTGAAATCCC GCTGGACCAG
GTATTGAAGA TTTTGGCGGA AGGAAAATCC GATCTGATGA AGGGGTTCAT TTCGCAGCGT
ACCAAGCGTC CGTTTGACGC TTATCTGGTC TTCAATGCAA AGACGGGGAA AATAGGTTTT
GAATTCCCGC CGCGGGAAAG GAAATATCCC GCTAAAAACG CTGCCGGAAA AACGGAAGGC
AAGGCGGAGA AGACGGGCCG GAACGCCGCC AAAACTGCCG GGAAAGACTC CAAATCCGGG
GGGGCTGCCA AAAAGGGGCG CAAGCAATAA
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| Protein sequence | MSKTLIIAEK PSVATDLARV LGKELGKFTR DKSGAFYQND RAIITSAVGH LLEQKKPMTE
EGKSLPWKFD YLPVIPRKFE LEPIKQSEDR LKKVLQLARS KDVTEIVNAC DAGREGELIF
HNLARYGKWT KPTRRLWMQS MTDEAILNAW HGMRSEADMK PLTNAAVCRS ESDWLVGLNS
TRALTILQSR GGFNVTPAGR VQTPTLAILT QRELEIQAFE PEPYSEVWAE FDVQSGSYSG
RWIDRDWKKN DHPHSRAERI WDPEQAAVIR DRCRGKAGTV TEEKKPVTTV APLLYDLTSL
QREAANRYGF SAKRTLQLAQ ECYEKHKVLT YPRTDSRYLP EDYLGKVYGI VGTVAEQNPE
FAPFARDILD NKRIKPNRRV FDTKKVSDHF AIIPTGKMEK LTGDAQKLFE MVMARFLAVF
FPAAVFEDTR RTTLITHQDG VTDAFLTTGR VLVEPGWQAV YGRKAGTSSK EELVPVRDGE
QAALREIEIR NAMTKPPARY NEATLLAAME GAGKLVHDEE LAAAMSERGL GTPATRASII
EGLISQEYIV RDGRELLATR RGIELIALLE RIGLKTLTSP SLTGEWEYKL KQMEQAALPR
DSFMEGIKTL TGEIVKRVKD FREAQQQVEL PEMELDCPSC HAHGLKNTLD AVSCRSCKFS
IRKVISGRDM ADEELKTLIV DGRTGILHGF TSRFGKPFEA GLELNDKFRA TLYFPAREED
EAAGVEEAVK VASVAIPDMG EHDVMETAKA WKIPSLTLGK EHAAVSVSRT ILGREIPLDQ
VLKILAEGKS DLMKGFISQR TKRPFDAYLV FNAKTGKIGF EFPPRERKYP AKNAAGKTEG
KAEKTGRNAA KTAGKDSKSG GAAKKGRKQ
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