| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0855 |
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| Symbol | |
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| ID | 6274314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1018288 |
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| End bp | 1020438 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612910 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_001877469 |
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| Protein GI | 187735357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.705806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGG ATTCCGTTCA TTTGCTGACC CGTTCCTCTC AGATGACCCT GTACAAAGAT
GAACAGGGCC GTGTGCGCCG CGCCTATTAC GGACCGAAGC TGCGTGAACC GGAGGATGCC
CTGGAAAACG CCGCGGATGC TCCTCTCCTG TATTCCTCCC TGGCGGATTC CGTAACAGGG
CTTCCCAATG CGTCCGGCGA GTACTGCATT TGCGTAACCC AGGCGGACGG GGCCCTTTCC
CTGAGCCTGG AATGCCTGGA TTGGGAAGTG CTGGAACTGG ATGACGACCG GGAAGAAGCC
GTCTTCTATG GGAAGGACCC TTCCTACCCT GTGCGGGTGG AAATCCACGT GCGCTCCCAC
AGGGAATCGG ACACTTTTCT GCAATGGGCG GTGATTCGGA ACGAAGGGAA AGAAGGCATC
CGCCTGCACC GCGCGGCATC CGCACAGCTG GGTTTGCGCG CAGAACGGTA TTTCGTCACC
AGCTTCCGCG GCACCTGGGG CGGCGAGTCC CTGATGAGTG AGGAAGAAGT GGCCCGGGGG
CATGAACTTG CCCTGGTATC CGGAACCGGC ACCCGCACCG CCCAGGAGGG AAGCCCCGGA
TTCATCATCT CTCTGGACGG TCCGGCGCGG GAGGATTCCG GGGAGGTGGT TCTGGGGGCG
CTGGCATGGT CCGGCAATTA CCGGATATGG TTCCGGCACA GCCCGTATCA TTACCTTTTT
GCCGGAGCGG GGCTGGATAT GGCTCCCGCG CCCTATCTGC TGGACGGCGG CGGTGTGTTC
AAGACGCCGC CCCTCATTCT GGCGCACAGT AAAAACGGCA AGGGAGAGGC CTCCCGGCGC
ATCCACCGCT GGGCGCGCCG TTACGGCCTG CGCGGTGGAG AATCAGAGAG GCCGACCTTG
CTGAATTCCT GGGAGGGGGT GTATTTTACC TTTACGGAAA AAGTGCTGCA CGGCATGATG
AAACGTGCGG CAGACTTGGG GATAGAGCTT TTCGTGCTGG ATGACGGCTG GTTTGGCGGC
CGGTTCCCCC GCAATGACGC CCGTGCCGGA TTGGGGGACT GGCAGGTTAA CCGCGCTAAA
TTGCCTCATG GACTGGAAGA CCTCATTCGC CAGGCGGAAA AACTGGGAAT ACGCTTCGGC
ATCTGGGTGG AGCCGGAAAT GGTGAACCCT CATTCGGAGC TTTATCAGAA CCATCCGGAG
TGGGCCATCG GTCTCCCGCA TCGGGAAAAC AGGCTGGAAC GCAGCCAGTA TTTGCTGGAC
CTGAGCAATC CTCATGTATG CAGGTACATT CTTGATGCCA TGCGGAAGCT GCTTGGGGAG
CATCCGGGTA TTTCCTACGT CAAATGGGAT TGCAACCGCA AAATTTCCGA CCCCGGCTCT
CCCTGGCTGG ATGCCTGCCG CCAGGGGAAT CTGCCCATTG ACTATGTGCG GGGCTATGAA
CGTATTCTTG AGACGCTGGC GGCGGAATTC CCGGATGTGA TATTCCAGGC CTGTTCCTCC
GGAGGAGGCC GCGCCGACTA TGGAACCATG CGGAAGCATC ATGAATTCTG GACGTCCGAC
AACACGGACG CTTATGAACG CGTGTTCATG CAGTGGGGCA TAGGCCACCT GTTCCCGGCT
ATTTCCATGG CCGCCCATGT GACCGCCTCC CCCAACCACC AGACGGGCCG CTCTGCTCCG
CTCAAATTCC GGTTTGACGT GGCCATGTCC GGCCGGCTTG GTTTTGAACT CCAGCCATGT
GACATGACGG AGGAGGACAT GGTTTTTTCC AAACGGGCTC TGGCGGAATA CAAGCGCATC
CGCCCCGTAG TCCAGTTCGG TGACTTGTAC CGGCTTTCCT CCCCGTATGA AAGCCGGGTG
GCCTCCCTGA TGTATGTATG CGGAAAACGG GCTGTCGTTT TCGCCTGGCT GATGGATAAA
TGGCTGGCGG ATTCCCCTCC GCCCCTGCGC CTGAAAGGCC TGAATTTTTC CGCTAGGTAC
TTGGTGCGGG AAATCAACAT GAATGAAGAC GGCTCTCTCA CGGATGTTCA CGAACGAAGG
CTGGGAGGCG ACTTTCTGAT GGACGCCGGC ATCCGCATCC GCTGGAAAAA GGCCTTCCAG
TCCGTCTGCC TGGAGGTGGT GGAAACAAAC CCTGATGCTC CGGCTTCATG A
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| Protein sequence | MIPDSVHLLT RSSQMTLYKD EQGRVRRAYY GPKLREPEDA LENAADAPLL YSSLADSVTG
LPNASGEYCI CVTQADGALS LSLECLDWEV LELDDDREEA VFYGKDPSYP VRVEIHVRSH
RESDTFLQWA VIRNEGKEGI RLHRAASAQL GLRAERYFVT SFRGTWGGES LMSEEEVARG
HELALVSGTG TRTAQEGSPG FIISLDGPAR EDSGEVVLGA LAWSGNYRIW FRHSPYHYLF
AGAGLDMAPA PYLLDGGGVF KTPPLILAHS KNGKGEASRR IHRWARRYGL RGGESERPTL
LNSWEGVYFT FTEKVLHGMM KRAADLGIEL FVLDDGWFGG RFPRNDARAG LGDWQVNRAK
LPHGLEDLIR QAEKLGIRFG IWVEPEMVNP HSELYQNHPE WAIGLPHREN RLERSQYLLD
LSNPHVCRYI LDAMRKLLGE HPGISYVKWD CNRKISDPGS PWLDACRQGN LPIDYVRGYE
RILETLAAEF PDVIFQACSS GGGRADYGTM RKHHEFWTSD NTDAYERVFM QWGIGHLFPA
ISMAAHVTAS PNHQTGRSAP LKFRFDVAMS GRLGFELQPC DMTEEDMVFS KRALAEYKRI
RPVVQFGDLY RLSSPYESRV ASLMYVCGKR AVVFAWLMDK WLADSPPPLR LKGLNFSARY
LVREINMNED GSLTDVHERR LGGDFLMDAG IRIRWKKAFQ SVCLEVVETN PDAPAS
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