Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0846 |
Symbol | |
ID | 6274323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1007089 |
End bp | 1009203 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642612901 |
Product | coagulation factor 5/8 type domain protein |
Protein accession | YP_001877460 |
Protein GI | 187735348 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3669] Alpha-L-fucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTAA ACCAGTTGAT TAAGGCGGCC GTATTGGGAG GGGCCCTGTG CACGGCCTGT TTTGCAGGAG CCGGGCCGAA GGGCTGTTTA ACGCCGTTAA AGCCTGTTCC TTCCGCGGAG CAGCTTGAAT GGCATGACAT GGAGATGTAT GCCTTTGTCC ATTTTACGAT TAATACCTTT ACTGGAAAAG AGTGGGGCTA TGGAGACGAA AAGCCGGAGC TGTTTCATCC TTCCGATTTC GATGCGGATG ATCTTGTCAG GACGCTGGCG GACGCCGGGT TCAAAGGGGT GGTGCTGACC TGCAAGCATC ATGACGGTTT TTGCCTGTGG CCCACAAAGA CGACCCTCCA TAGTGTAGCG GCTTCTCCGT GGAAGCAGGG GAAGGGCGAT GTGGTGAAGG AGGTGTCCCG CGCGTGCGGA AAGTATGGCG TCAGGTTCGG TGTTTATCTG TCTCCGTGGG ACCGCAATGC CGCCTCTTAC GGAACGCCGG ATTATATCCG GATGTACCGT CAGCAGTTGA AAGAGCTGGC GACGGGATAC GGTTCCATTT TCCTGGCTTG GTTTGACGGA GCGAACGGAG GGGATGGGTA TTACGGAGGA GCGCGGGAAA GGCGTTCTAT CGACCGGAGC GCGTATTACG ACTGGAAGGC AACTTGGGGT GAGTTGAAGA AACGGCAGCC CGGAGCCGTC ATCTTTTCCG ACGTAGGGCC GGATGTCCGC TGGGTAGGCA ATGAAAGCGG CTATGCGGGT TATCCCTGCT GGGCCACATA CACCCCCGTT CCGCTGCAAG CCGGGACGGA ACCCGCGCCC GGCACCGTGC GCTACCGGCT GGGCACGGAA GGCACCATGG ACGGCAAGTA CTGGATTCCT GCGGAGGTGG ATGTTTCCAT TCGTCCGGGC TGGTTCTGGC ATGAGCATGA AAATTCCCGC GTCCGGACGC CGGAAAATCT GCTGAAGTTG TATTTTGACA GCGTAGGCAG AGGGGCCAAT TTGAATTTGA ATGTGCCGCC GGACCGCCGC GGCCGCATTC ATGAAGAGGA TAAAAAGTCT CTGGCGGGCT TCCGTGTGCT GCTGGATGAG TTGTATTCCC GCAACTTCGC CTCCGGTGCA CAGGCTGAGT CCTCCTCTTC TTGGAAGGGG CACGGTGCGG AACAGGTTCT GGACCGGAAA CGGACGACGT ACTGGGTGGC CGCTCCGGAA GATAAGCATC CCTGCGTGGT ATTGAAATTG CCGGAGCCCG CGGCGTTTGA CGTCATCCGG CTGGCAGAGC CCATCCAACT GGGGCAGAGG GTGCGCAAAT TCCGTGTGGA GGTGCGTGAG AACGGCCAGT GGAGCAAGTG GACGGAGGGG GCCAGCATAG GGGCCAGAGT TCTTCTGAAA GGAAGGCCCG TGACGGCGGA TGGAGTGCGC GTGGTGCTGG AACAATCCCG GGCCGTTCCG GCCCTGTGCG AGGTTTCTTT ATGGAAGTAT CCCGTCATCC TGAATGCTCC GGCGGTGAAT TATGACCGCA ATGGACGGGT GACCCTGGCT TCCGCGGAGA ACGTAGTGAT CAGGTACACC ACGGATGGAA CGGAACCCGG TCCGCAGTCC GCCATGTACA GGAATCCTTT CTTTCTCCCT GCCGGGGGGA CGGTGAAAGC GGCGGCCGAA TATCGCGGCA GAAAATCTTC CGTAACCACT CAGATTATTC CTGTCCCCAC GCGGGACTGG AAAGTGGTGG CCGGGGAAAG AAGCGCCGCC GCTCCGGAAC TGGCTATTGA CGGAGATTCT TCCACCCTCT GGCATACGCA TGCCGCCCAG GGAGAGCTGG CGCCTCCGCA GGCGCTGGAG ATCGACATGG GGCGTCCGGT TAACGTTGCC GCCGTTATCT ATACGCCGCG CAGGGATTCC TCAACGGGAA CGGTTGACCG CTATGCCGTC TATTTGAGCA TGGATGGGAA CACATGGGGG GCTCCCGCTG CGGAGGGGGA GTTCTCTAAT ATCCGCGCCA ATCCCGTTCC GCAGCGGATT GACCTGAAAG CGCCTGTCAA AGCACGTTAT CTGCGTTTTG TAGGCAAGCG GGTGGTGGAA GGCAGCCATG TTGCCGTTGC CGAGCTGGGC GTATTGGGAA AATAA
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Protein sequence | MNLNQLIKAA VLGGALCTAC FAGAGPKGCL TPLKPVPSAE QLEWHDMEMY AFVHFTINTF TGKEWGYGDE KPELFHPSDF DADDLVRTLA DAGFKGVVLT CKHHDGFCLW PTKTTLHSVA ASPWKQGKGD VVKEVSRACG KYGVRFGVYL SPWDRNAASY GTPDYIRMYR QQLKELATGY GSIFLAWFDG ANGGDGYYGG ARERRSIDRS AYYDWKATWG ELKKRQPGAV IFSDVGPDVR WVGNESGYAG YPCWATYTPV PLQAGTEPAP GTVRYRLGTE GTMDGKYWIP AEVDVSIRPG WFWHEHENSR VRTPENLLKL YFDSVGRGAN LNLNVPPDRR GRIHEEDKKS LAGFRVLLDE LYSRNFASGA QAESSSSWKG HGAEQVLDRK RTTYWVAAPE DKHPCVVLKL PEPAAFDVIR LAEPIQLGQR VRKFRVEVRE NGQWSKWTEG ASIGARVLLK GRPVTADGVR VVLEQSRAVP ALCEVSLWKY PVILNAPAVN YDRNGRVTLA SAENVVIRYT TDGTEPGPQS AMYRNPFFLP AGGTVKAAAE YRGRKSSVTT QIIPVPTRDW KVVAGERSAA APELAIDGDS STLWHTHAAQ GELAPPQALE IDMGRPVNVA AVIYTPRRDS STGTVDRYAV YLSMDGNTWG APAAEGEFSN IRANPVPQRI DLKAPVKARY LRFVGKRVVE GSHVAVAELG VLGK
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