| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0845 |
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| Symbol | |
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| ID | 6274324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1006117 |
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| End bp | 1006950 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612900 |
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| Product | apurinic endonuclease Apn1 |
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| Protein accession | YP_001877459 |
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| Protein GI | 187735347 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0648] Endonuclease IV |
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| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.220183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATACA TCGGATGCCA CCTCTCCTCC GCAAAAGGCT ATGAAGCCAT GGGCCGGGTT
GCCCTCTCCA TCGGCGCCAA TACTTTTCAG TTCTTTACCC GCAATCCGCG GGGGAGCAAA
GCCAAAGCTA TTGACGAACA GGATATTGCC CGTTTTCTGG AATTAGCGCG AAATAACGGA
TTCGGCACGC TGCTGGCACA CGCCCCCTAC ACGTTGAACC CCTGTTCCGC AGACCCCAGT
GTCGCCCGTT TTGCGGCCCA GGTACTGAAA GAGGATCTGG AACTCATGGA ACATCTGCCG
GGGAATCTTT ATAACTTCCA TCCCGGCTGC CACGTAGGGC AGGGAGTGGA AAAAGGCATT
GAACTGGTGG CGGATCAATT AAACGACGTG CTTTCGCCGG AACAAAAGAC CATTGTTTTG
CTGGAAACCA TGTCCGGCAA GGGAAGCGAA GTCGGCCGGA CCTTTGAAGA ACTGGCCGCC
ATCATGGAGC GGGTGGACCT GAAGGACAAA CTTGGCGTAT GCCTGGATAC CTGCCATGTC
TATTCCGCCG GATATGATAT CGTCAACAGG CTGGATTCCG TACTGGAACA TTTTGATGCC
GTGCTGGGTC TGGAACGCCT GCGCGCCATC CATCTGAATG ACAGCATGAC ACCCTTTTCC
TCCTTCAAGG ACCGCCATGA AACCATCGGC AAGGGTTCCC TGGGAGAACA GGCCTTCATC
AACATCATCA ACCATCCCGT TCTGCGGGAA TTGCCCTTTT TCCTGGAAAC GCCCAGGGAC
GACGCCGGGC ACGGCGAAGA AATAACGTGG CTGAAGGAAC ATTACCGCAA CTGA
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| Protein sequence | MPYIGCHLSS AKGYEAMGRV ALSIGANTFQ FFTRNPRGSK AKAIDEQDIA RFLELARNNG
FGTLLAHAPY TLNPCSADPS VARFAAQVLK EDLELMEHLP GNLYNFHPGC HVGQGVEKGI
ELVADQLNDV LSPEQKTIVL LETMSGKGSE VGRTFEELAA IMERVDLKDK LGVCLDTCHV
YSAGYDIVNR LDSVLEHFDA VLGLERLRAI HLNDSMTPFS SFKDRHETIG KGSLGEQAFI
NIINHPVLRE LPFFLETPRD DAGHGEEITW LKEHYRN
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