| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0824 |
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| Symbol | |
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| ID | 6274353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 969353 |
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| End bp | 973147 |
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| Gene Length | 3795 bp |
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| Protein Length | 1264 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642612874 |
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| Product | glycoside hydrolase family 2 TIM barrel |
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| Protein accession | YP_001877438 |
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| Protein GI | 187735326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000954733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00757756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGAACGA CCAGATCCTG GCTTTTATCC TGTACCGCGC TGGCGGTAAG TTCCGCCATG
TGCGGCCTGG GAGCACCGGG CGATTCCGCC CCCGCGCCAG CCCCCACAGG GCTGGAATGG
GAACAGGAAC AAAACCTGCA TTTGAATAAG GAAGCTCCAA CCGCCTTTTT CGCGTCTTTC
AGCGATTTGC AGTCCGCCTT GAAAGTGCTG CCTGAAAACA GTAAATGGCG CAGGTCCCTG
AACGGTCAGT GGAAGTTCCA CTGGGCGAAG GATCCCCAGA GCCGCCCGGC CGATTTTTAC
AAGCCGGATT ACGACGTAAA GGACTGGAAG GAGATTAAGG TGCCTTCCTC CTGGCAGACT
CAGGGTTACG GCACCCCCAT TTATTCCAAT CAGCCGTATC CCTTTGAACG CTCCTGGCCT
TATGTAATGA AGGAGCCTTC CAACAAGAAT TATACGTCCT ACAAGGAACG GAACCCCGTA
GGTTCCTACC GCCGCACTTT TGAAGTACCT GCGGACTGGG ACGGCAGGGA AGTGTACATG
CAGTTTGACG GAGTGGATTC CTTCTTCTAC CTCTGGATCA ACGGGCAGTA TGTAGGTTTT
TCCAAAGATT CCCGGAATCC GGCCCGTTTT GACATCAGCC CCTACCTTAA GAAGGGGGAG
AATGTGGTGG CCGCAGAGGT GTACCGCCAT TCCGACGGAG CATATCTGGA ATGCCAGGAC
ATGTTCCGCC TGTCCGGCAT TTTCCGCAAT GTTTCCATCT TTGCGCTGCC GAAAGTTCAC
ATCCGCGACT TTTTCGCACA GGCCAATCCG GTGGACCAGA GGGATTGGGC TTTGAATATT
GACCATGCCA AACCGGGGAC CGTGGACGGC GATTGGCGCC TTCAGGTGGA TGTGGATGTT
CGCAATCTGT TTCCGGCAAC GGAAAAGCTG GACGGCTGCA CGGTTTCCAT GGCCCTGTAT
GACGCTGCCG GAAAACTGGT AGAACCTGTC AAGCCCAAGG ATGCGCCATA TGACGGCGTG
TTGGAAAAGC CCTTGCGCAT TACCGGCATG AAGGATTTTA AAACTTCCCT GCTGGGCATT
TATTCCAAAC CCAGACTATG GTCTGCGGAG GATCCCAACC TGTACACCCT GGTACTGACG
CTGAAGCGTG ACGGGAAGAC GGAAGAAATG GTTTCCTCCC GCGTGGGTTT CCGCAATGTG
GTGATTAAGG ACAGCGTGTT CCTGGTAAAC GGCCAGCCGG TGAAGGTAAA GGGCGTGAAC
CGCCATGAAA GCCATCCGGA AACAGGGCAT TACGTGACTC CGGAGCAGAT GGAGGAAGAA
GTGCGGATGA TGAAACGCGC CAATATCAAC CACGTGCGCT GTTCCCATTA TCCCGCGGAT
CCTTATTTTT ATTACCTCTG TGACAAGTAC GGCATTTACG TGCAGGATGA GGCCAACATC
GAGTCCCACG GCTATTACTA TGGCAAGGAG TCCCTTTCCC ATCCCATTGA GTGGATGCCG
GCCCACGTGG ACCGCATCAT GGCGATGGTG GAGCGCAACA AGAACCATCC CTGCGTGATT
ATGTGGTCCC TGGGGAATGA AGCCGGCCCC GGCCAGAATT TCCGCAGTGC GGAAAAGATG
GTGAAGGCCA GGGATATGTC CCGCCCCACC CACTACGAAC GCAATAATGA CATTGTGGAC
TTGGGGTCCA ACCAGTATCC GTCCGTGGAC TGGACGCGTT CCATGGCGGG CAACAAGGAT
TTCCCCAAGC CCTACTATAT TTCCGAGTAC GCACACAACA TGATGAATGC CATGGGCAAC
CTGGCGGATT ACTGGGAGGC CATCGAGTCT TCCGACCGCA TTATGGGCGG CGCCATCTGG
GACTGGGTGG ACCAGGGCTT GTACAAGACC CTGCCGAATG GAGAAAAGAT GCTCTGCTAT
GGCGGCGATT TCAACGACCA TCCCAATAGC GGCCAGTTTG TGTTCAACGG CACCATCCTG
TCGGATCGTA CGCCGGAACC GGGTTATTTT GAAGTCAAGC ACGTCTATCA GAATATTTCC
ACATCTTTGA CGGACGACGG CAGGATTTCC ATTTTCAACA AGAATTTCTT TACGGACCTT
TCTTCATACG ACATTACCTG GACCCTCACG GAAAACGGCA ATGCAGTGGC TGAAGGCAGG
TTGGACACGC CTCCGGCCGG TCCCAGAGAA AAGATTGTGG TTCCCATTCC GGACATTCCC
CAGTTGAAAA ACCGGAAACC GGGGGTGGAG TATGCCTTGC GCATAAGTTA CAAGCTGAAG
AAGGACAGGG GGTGGGCCAA GAAGGGATAT GAATTGGCCT TTGACCAGCT CCAGCTTCCC
GTGCAGGGAG ATCTGCCTGT GTTCAAGGCT CCTGCGGGCA AAGTCAGCCT CAGCACGGAC
AAGCATACCG TTTCCGGCAA GGATTTTTCC GTGCAGTTTG ACGCGTCCAC CGGGGAACTG
GCCCAGTTCA CGGTAAACGG CAAGCCTCTG TTTAAAACGC CCATGGCGGT GAACGCCCTG
CGCGCCGCCT CCAGCAATGA GCCGGGCGTC ATGGCCAAGA GCATGGCTAA CGGCCTCCGT
GAACTGAAGC ATGAACTGCT CAGTTACGAA GCCATTGATA ACGGCAATAG CGTCACCGTC
AAGCAATCCA TCAAGGTAAG CGGCAAACAG GCTGAAAACA TCAGCGGCTA CGGCGATACC
AAGACCACCA TCACGGCCAG GAAGCAACCC CTGAACGATA CGAACACCCA TTTCATCAAT
AATTTGGAAT GGACCATCTA TGCGGATGGA ACTGTCGTCT GCCAGTCCGT ACTGCTTCCG
CGCGGCAATC CCCTGGAACT GCTGCGCCTG GGATACGAAC TCCAGTTGCC GGCGAATATG
GACAACGTAG CCTATTACGG GCGCGGGCCG GAAGAAAACT ATGCGGACCG CAAGAGCGGC
ATGCCTCTGG GCGTGTATAA AACGACAGCC TGGGATTCTT TCTTCCCGTA CGGCAGACCG
CAGGATTGCG GCAACCATGA GGATACCCGC TGGGTGGCCG TTACGGACGA CAAGGGGAAC
GGCCTGCTTT TCGGTTCCGT GGGCGCACCG TTCGCTTTCT CCGCCCTTCC GTATACCACC
ACGGATTTGA TCCTGGCAAA CCACCCCGTG GAACTGCCGA AGACGACGGA TAAGACCGTT
CTGGTTCTCT CTTCCGCCAC GCGCGGCCTG GGGGGTGCTT CCTGCGGTCC CGGCCCTATG
GGCAGGGACA TCATCAAGGC CAACAAGCCC TACCCGATGT CCTTCTTTAT GCGGCCCATT
ACCGCCAAGT CCTACAAGGG GGAAATCCGC GTGCCTGCGG CCCGGCTGGA TATGACCATG
CTGACCCGCA CGGACAAGTA TACGGTCAAG AGTGTAACCA GCCAGGAGCA GGGCGAAGCG
GACGCCGAAT TCGCCATTGA CGGTGATCCC GGCACCTTCT GGCACTCTGA ATACAATAAA
ACCGTGACCA AACATCCGCA TGTACTGGCC GTGGACCTGG GTAAGGAGCG GGAATTCTCC
GGAATCACTT ATCTTCCACG TCAGGATGGC AGCAGCAATG GCCGCGTGAA AGATTATTCC
GTGGACGTGA GCACGGACGG AGAGAAATGG CAGCCTGCCG CCAAGGGCTC CTTCCCGGAC
AGTGCTGACC TGCAGGAAGT GAAATTCCAA GCTCCCGTCA AGGCGCGTTA TTTCCGCTTC
TCCGCCCTTA GTGAGGCGCA GGGGCGGGAT TACGCCGCCG TAGCGGAACT GGATATCATT
CCCGTTAAGA AATAA
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| Protein sequence | MRTTRSWLLS CTALAVSSAM CGLGAPGDSA PAPAPTGLEW EQEQNLHLNK EAPTAFFASF
SDLQSALKVL PENSKWRRSL NGQWKFHWAK DPQSRPADFY KPDYDVKDWK EIKVPSSWQT
QGYGTPIYSN QPYPFERSWP YVMKEPSNKN YTSYKERNPV GSYRRTFEVP ADWDGREVYM
QFDGVDSFFY LWINGQYVGF SKDSRNPARF DISPYLKKGE NVVAAEVYRH SDGAYLECQD
MFRLSGIFRN VSIFALPKVH IRDFFAQANP VDQRDWALNI DHAKPGTVDG DWRLQVDVDV
RNLFPATEKL DGCTVSMALY DAAGKLVEPV KPKDAPYDGV LEKPLRITGM KDFKTSLLGI
YSKPRLWSAE DPNLYTLVLT LKRDGKTEEM VSSRVGFRNV VIKDSVFLVN GQPVKVKGVN
RHESHPETGH YVTPEQMEEE VRMMKRANIN HVRCSHYPAD PYFYYLCDKY GIYVQDEANI
ESHGYYYGKE SLSHPIEWMP AHVDRIMAMV ERNKNHPCVI MWSLGNEAGP GQNFRSAEKM
VKARDMSRPT HYERNNDIVD LGSNQYPSVD WTRSMAGNKD FPKPYYISEY AHNMMNAMGN
LADYWEAIES SDRIMGGAIW DWVDQGLYKT LPNGEKMLCY GGDFNDHPNS GQFVFNGTIL
SDRTPEPGYF EVKHVYQNIS TSLTDDGRIS IFNKNFFTDL SSYDITWTLT ENGNAVAEGR
LDTPPAGPRE KIVVPIPDIP QLKNRKPGVE YALRISYKLK KDRGWAKKGY ELAFDQLQLP
VQGDLPVFKA PAGKVSLSTD KHTVSGKDFS VQFDASTGEL AQFTVNGKPL FKTPMAVNAL
RAASSNEPGV MAKSMANGLR ELKHELLSYE AIDNGNSVTV KQSIKVSGKQ AENISGYGDT
KTTITARKQP LNDTNTHFIN NLEWTIYADG TVVCQSVLLP RGNPLELLRL GYELQLPANM
DNVAYYGRGP EENYADRKSG MPLGVYKTTA WDSFFPYGRP QDCGNHEDTR WVAVTDDKGN
GLLFGSVGAP FAFSALPYTT TDLILANHPV ELPKTTDKTV LVLSSATRGL GGASCGPGPM
GRDIIKANKP YPMSFFMRPI TAKSYKGEIR VPAARLDMTM LTRTDKYTVK SVTSQEQGEA
DAEFAIDGDP GTFWHSEYNK TVTKHPHVLA VDLGKEREFS GITYLPRQDG SSNGRVKDYS
VDVSTDGEKW QPAAKGSFPD SADLQEVKFQ APVKARYFRF SALSEAQGRD YAAVAELDII
PVKK
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