| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0821 |
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| Symbol | |
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| ID | 6274356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 966666 |
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| End bp | 967160 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612871 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_001877435 |
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| Protein GI | 187735323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0727806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGGG CACACATGAA AACGCCATTC ATTTTAACCT GCGCCTGCGC TGCCGCGCTG
GTATTCCCCC TCTCTTCCTG CTCCACCCAG AATTCCTCCA CGGCCGGTTA CGACACTGCG
GAACCGGCCA GCGGCGAAAT CCCGCCGTGG ATCGCGGAAA GCTCTGATCC CGCTTACGAA
TCCGGCCATT ACAGCCCGGT TCAGAGTTCT TCCAGCTACG CTTACAATCC CCCCGCCAAG
CCTTCCGTCA CTAAAAAATC ATCCGCGCGG AAGAGCACGG CCGGCAGCAA ATCCTCCCGC
AGCACGGCTG CCAGAAAGAG CTCCTCCCGT AAATCCGCTC CCAAGGCCCG CACCTACACC
GTGAAGAAAG GCGATACGCT GGGAGCCATC GCCCGCAGGA ACGGCACCTC TGTCAAGGCC
CTTAAAAGGG CTAACGGCCT TAAGTCCGAT CTGATTCACA TCAACCAGAA GTTGACGATT
CCGCGTTCCA AGTAA
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| Protein sequence | MNRAHMKTPF ILTCACAAAL VFPLSSCSTQ NSSTAGYDTA EPASGEIPPW IAESSDPAYE
SGHYSPVQSS SSYAYNPPAK PSVTKKSSAR KSTAGSKSSR STAARKSSSR KSAPKARTYT
VKKGDTLGAI ARRNGTSVKA LKRANGLKSD LIHINQKLTI PRSK
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