Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0819 |
Symbol | |
ID | 6274358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 964236 |
End bp | 965615 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642612869 |
Product | multi antimicrobial extrusion protein MatE |
Protein accession | YP_001877433 |
Protein GI | 187735321 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.10085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA ATGCAATTGA TTTAGGCACA CTGGACGTAT GCACATTATT CAGAAAGTAT TTTATCCCGA CCTTATTCGG GATGCTTAGC ATATCGGCAG TAACGGCAGT AGACGGAATA CTCGTCGGTC ACGGAATCGG AAGCGATGGC ATTGCCGCTA TCAATATATG CATTCCCCTG CTGATGTTGT TTACCGGGAT AGGGCTCATG GCAGGCGTAG GCTCATCCGT AGTCGCTTCC ATTCAGCTAT CAAAAGGAAA ACTGGAAGCC GCGCGCCTTA ATGTCACCCA GGCCTTGTTG TTCGTCACCA TTGCCGCCAT CGTGCCATCT GCCTTGATGA TGGCATATCC GTCAGCTACA GCCCGATTTT TAGGCGCTTC CGAACATCTT ACCCCCATGG TTAGGGAATA CCTGTTGTGG TTCATCCCCT CGTTGATATT CCAGATGTGG TGCTCTGTCT GCCTATTCAT GATTCGTTTG GATGGCGCTC CGAAGTTGGC TATGATGTGC AATATCATTG CTGCAATCAT CACCGTAATA CTCGGTTGGC TGTTTATCTT TCCATTGGGC TGGGGATTGA CGGGAGCTGC TTTCGCCGCA ACCATAGCAC TGTTTGCGAG CGGCGCCACG GGCCTTATTT ATTTATGGAT ATTTGCACAT AAACTGCGGC TTTATCCTAT TAAATGGAGC ATCAGAAGTT TTCGGTTCTC CCTCCTTAAT ATTGTCTGCC AATGTCGCAT CGGTTCTTCC GCTTTGCTGA CTGAAGCGAC ACTGGCCACG CTCATGTTCG TCGGGAACCA CACATTGATG AAATATCTGG GAGATAATGG AGTAGGAGCG TTCGGCATTG CCTGCTATTA CCTTCCGTTC GTATTCATGG TAGGCAATGC CATAGCGCAA TCAGCGCAAC CCATCATCAG CTATAACTTC GGGCTTGGAG AGAAAAAACG CGTAGCCGAT ACAAAACGGA TCGCATTATT TACCTCCGTT GTTTGCGGCA TAGTCACGAC GGCAGCATTC ATTTTGTTCC CGCATATTCT GGTAGGCTTG TTCGTCAATC CGGACAGCAC TGCGGCGCTC ATAGCCATTG AGGGATTTCC ATATTTCTCC CTGGCATTTG TTTTCTTCAT CATCAACCTG ATGCTCATCG GTTATTACCA AAGCGTGGAA AATGTAAAAC TCGCCAATTT GTTTGCCCTG TTGCGAGGAT TTGTTTTTCT TATTCCATGC TTTATCCTGT TGCCTGAAGC AATGGGAACG AACGGTGCGT GGCTAGCACT TTGTCTGTCG GAAATGTTGA CCATATTAAC AGTTGCTGTC CTATTTATTC TACGCAAAAA GAAAACACTT CTTCATCAAA CAGGTGAAGA ATGCAGTTAA
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Protein sequence | MKRNAIDLGT LDVCTLFRKY FIPTLFGMLS ISAVTAVDGI LVGHGIGSDG IAAINICIPL LMLFTGIGLM AGVGSSVVAS IQLSKGKLEA ARLNVTQALL FVTIAAIVPS ALMMAYPSAT ARFLGASEHL TPMVREYLLW FIPSLIFQMW CSVCLFMIRL DGAPKLAMMC NIIAAIITVI LGWLFIFPLG WGLTGAAFAA TIALFASGAT GLIYLWIFAH KLRLYPIKWS IRSFRFSLLN IVCQCRIGSS ALLTEATLAT LMFVGNHTLM KYLGDNGVGA FGIACYYLPF VFMVGNAIAQ SAQPIISYNF GLGEKKRVAD TKRIALFTSV VCGIVTTAAF ILFPHILVGL FVNPDSTAAL IAIEGFPYFS LAFVFFIINL MLIGYYQSVE NVKLANLFAL LRGFVFLIPC FILLPEAMGT NGAWLALCLS EMLTILTVAV LFILRKKKTL LHQTGEECS
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