| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0813 |
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| Symbol | |
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| ID | 6274364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 957476 |
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| End bp | 958546 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642612863 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001877427 |
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| Protein GI | 187735315 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.35335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAA ACGGCGTGAA TACGAAAAAT CAGGATGACT GTTGGATGAA CATGGCCATA
AAACTGGCCT CAAATGGAAT TGGACTTACG AGTCCGAATC CCTGCGTGGG GGCAGTCATT
GTGCATGAAA ACCAGGTGAT TGGTTCGGGA TTTCATAAAA AAGCCGGCTT GCCTCATGCG
GAAAGAGAGG CCATTGCCGA CGGAGTGGCG AATGGCAATG CCCCCCTGTT CGCGGACTCA
ACTTTGTATG TTACTCTGGA ACCATGCAGT ACTTCCGGGA AAACACCGCC TTGTACGGAT
GCCATTTTGA AATATCGTTT CAAACGGGTA GTTTATGGTT CGGAAGATCC TAATCCCAAA
CACCGCGGCG CTGCGGCTGA TATTCTTGAA CAGGCCGGCA TCAAGGTTAC CCGCGGGGTT
CTGGAGAAGG AATGTGATCG TTTAATCAGG AGGTTCAGAG TGAACATGCT GGAAGGGCGT
CCCTGGGTAA TTGCAAAAAG CGCCATGTCT CTGGATGGCC GCATTTCCCG TAGTCCGGAA
CGTTCCCAAT GGCTGACGAA TGAAAAATCC AGATCTTTTG TACATACCCT GCGTGCCGAA
TGCGATGCGG TTCTTACCGG AGGGAATACC GTGCGTCTGG ACAATCCGTC TCTGACCATT
AGGAAACCGG ATCGTCCTGT TTCTCCCCTT AAGGAACAAC CCTGGCGTAT TATTCTAACC
CATGATGCCT CTTCCATACC TGCGGATTCC ATTTGTTTAA CAGATGAATT TCGTGACCGC
ACTTTGGTTG TGGAGAATGT TTTTAGTTAT TTGGAATTAT TAAAAAAATT ATATAATGAT
AAAAAAATAG GAACTATCCT GCTGGAAGCG GGAGGCTGTC TGGTCCGGGA ATTTCTGAAA
GCCGGTTTAG TCGACGAGTG GGTGGGGTTT TATGCTCCCA TCATTATCGG CGGCGGTGCG
GACGGCGTAG CGCCCGGTCC GTTTCTGGAG CATGAAGCCC ATCTTGAACA ACCTGTTGTA
AATATTTTTG GAGGTGATGT ATGTATCCGG GGAGATATCT GTTACCGGTA A
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| Protein sequence | MLQNGVNTKN QDDCWMNMAI KLASNGIGLT SPNPCVGAVI VHENQVIGSG FHKKAGLPHA
EREAIADGVA NGNAPLFADS TLYVTLEPCS TSGKTPPCTD AILKYRFKRV VYGSEDPNPK
HRGAAADILE QAGIKVTRGV LEKECDRLIR RFRVNMLEGR PWVIAKSAMS LDGRISRSPE
RSQWLTNEKS RSFVHTLRAE CDAVLTGGNT VRLDNPSLTI RKPDRPVSPL KEQPWRIILT
HDASSIPADS ICLTDEFRDR TLVVENVFSY LELLKKLYND KKIGTILLEA GGCLVREFLK
AGLVDEWVGF YAPIIIGGGA DGVAPGPFLE HEAHLEQPVV NIFGGDVCIR GDICYR
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