Gene Amuc_0812 details

Gene Information

• Locus tag: Amuc_0812
• ID: 6274365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Akkermansia muciniphila ATCC BAA-835
• Kingdom: Bacteria
• Replicon accession: NC_010655
• Strand: +
• Start bp: 955103
• End bp: 956989
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642612862
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001877426
• Protein GI: 187735314
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 53
• Fosmid unclonability p-value: 0.699905
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACTCCT CCTCTTCTTC CGTTTTTCCC CTGTTTGACG TTCTCGTCGT CGGCGCCGGG 
CACGCAGGCA TTGAGGCGGC ACTGGCAGCA TCCCGTCTGG GGTGTTCCGT CGCCGTCCTA 
ACTCATAACC TGGATACTAT CGGACAAATG TCCTGCAATC CGGCTATTGG GGGACTTGCC 
AAAGGGCATA TCGTCCGGGA AATAGATGCC ATGGGGGGAG CGATGGGGTT GAACACGGAT 
GCTACCGCCA TTCAATTCCG GATGCTGAAC GCTTCCAAGG GGCCCAGCGT GCGCGCTCCC 
CGCGCCCAGT GCGATAAAAC AGCCTACCGC ACAAGAATGA AAATGGTTCT GGAAACCGCC 
CCCGGCATAC GCCTGTTTCA GGGAGATGTG GTCAAACTGC TCGTCAATGG AGAACAGCAG 
GCAACGGGAG CCGTTACTTC TCTGGGCTGC GCCATCCATG CCCGCAGCGT GATTATCTGC 
TCCGGGACAT TCATGAAGGG ATTGCTTCAT GTGGGCCTTC AACACATAAC AGGAGGCCGA 
ATGGGTTGCG CTTCTTCCAG CCTTTCCGCC GATCTTGCCA TGCTGGGTTT TCAGGTGGAA 
AGGCTTAAAA CAGGAACTTC TCCCCGCGTC AATGGAAGAT CCATCGACTT TTCCGTCTGC 
GAAATACAGC CCGGAGACGC TCCGGAAGCC CTGTTCAGCT ACCGTTCCCG TGATATACTG 
AAACGTGATT CCGAACCCTT TTGCACTTTG AACACGTGGG GAGATGAAAA TTTCCGGATG 
AAGCAAATGC CGTGCTGGAT CACCTACACC AACCAGACTA CGCACGACAT TATCCGGAAG 
AACTTAAAAT TCAGCCCCCT TTACAGCGGT ATCATTGAAG GCGTAGGCCC CCGGTATTGT 
CCTTCCATAG AAGATAAAAT CGTGCGCTTT GCGGAAAAAA ACAGCCATCA GGTATTCCTG 
GAACCGGAAG GCCGCAGTAC GGAGGAATTC TACCTTAACG GAGTTTCTAC TTCACTGCCC 
TACTCCGCTC AGTGCGACTT CATCCATACC ATTCCCGGCC TGGAAAACGC ACAGCTGATC 
CGTCCGGGAT ATGCGGTGGA ATACGACTTC TGTCCTCCCA CGCAATTGCA TCCTACGCTG 
GAAACAAAAC TGGTGGAAAA CCTGTACTTT GCAGGTCAAA TCAACGGTAC TTCCGGCTAT 
GAAGAAGCCG CAGCGCAAGG ACTAATGGCG GGAGCGAACG CCGCTCTGAA AACCCTGGGC 
AAACCTTCTC TGGTGCTGCG CCGGGATCAG GCTTACATCG GCGTCATGAT AGACGACCTT 
GTTACCAAAG GAACCGATGA ACCTTACCGC ATGTTTACCA GCCGGGCAGA ATTCCGCCTG 
TTGCTGCGTC AGGATAATGC AGACCTGCGG TTGGCCCCTC TGGCTTTTGA AGCGGGCCTT 
ATTACCTGTG AAATGGCCCG GAAGGCTGAA GACAGGAAAA ACGCCGTTGA AGAAGGAATA 
ATAAAAGCTG CCGCGCTTAA ACATGAAGGA GTTTCTCTCT CCACATGGCT TAAAAGGCCC 
GGCAATGACT GGACTCTATT GCCTGAAGAA CTGAAAAAAA TGTTCCACGT GGAACATTTG 
GATGCCATTG CTACGGATAT CCAGTACGAA GGGCATATTG AAAGGCAGAA AAAACAGGCG 
GAAAAAATCA TACGGATGGA AAATAAAACT ATTCCCTCCG ATATTGATTA CAAACATGTC 
CATGCCTTAA AAAAAGAGGC TGTCATCAAG CTGGGCAACA TACGTCCTGC AACTATCGGG 
CAGGCCTCCC GCATTCCTGG AATTACCCCG GCAGATATCG CCCTGTTGCT TGTGCATCTG 
CAAAAACGCA GCAGGCAACA AACATAA 

 

Protein sequence

MNSSSSSVFP LFDVLVVGAG HAGIEAALAA SRLGCSVAVL THNLDTIGQM SCNPAIGGLA 
KGHIVREIDA MGGAMGLNTD ATAIQFRMLN ASKGPSVRAP RAQCDKTAYR TRMKMVLETA 
PGIRLFQGDV VKLLVNGEQQ ATGAVTSLGC AIHARSVIIC SGTFMKGLLH VGLQHITGGR 
MGCASSSLSA DLAMLGFQVE RLKTGTSPRV NGRSIDFSVC EIQPGDAPEA LFSYRSRDIL 
KRDSEPFCTL NTWGDENFRM KQMPCWITYT NQTTHDIIRK NLKFSPLYSG IIEGVGPRYC 
PSIEDKIVRF AEKNSHQVFL EPEGRSTEEF YLNGVSTSLP YSAQCDFIHT IPGLENAQLI 
RPGYAVEYDF CPPTQLHPTL ETKLVENLYF AGQINGTSGY EEAAAQGLMA GANAALKTLG 
KPSLVLRRDQ AYIGVMIDDL VTKGTDEPYR MFTSRAEFRL LLRQDNADLR LAPLAFEAGL 
ITCEMARKAE DRKNAVEEGI IKAAALKHEG VSLSTWLKRP GNDWTLLPEE LKKMFHVEHL 
DAIATDIQYE GHIERQKKQA EKIIRMENKT IPSDIDYKHV HALKKEAVIK LGNIRPATIG 
QASRIPGITP ADIALLLVHL QKRSRQQT