Gene Amuc_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0809 
Symbol 
ID6274368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp951679 
End bp952161 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content52% 
IMG OID642612859 
Productacetolactate synthase, small subunit 
Protein accessionYP_001877423 
Protein GI187735311 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.76637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTC ATACTATCTC CGTACTTGTT GAAAACAAAT TTGGCGTGCT TGCCCGCATT 
GCCGGTTTGT TTAGTGGACG GGGCTACAAT ATTCATTCGT TGAACGTTGC CCCTAGCCAG
GACCCGCGCT TTTCACGGAT GACCATCGTC GTACGCGAAA AGGAGGATGT TCTGGACCAG
ATTATCAAGC ATCTGGAAAA ACTGGTCAAC ACGGTGGAAG TAGTAGATTT CCGCAATACG
GACAATGTGT ACCGGGAAAC GGTATTGACC CGCATTGGCG TAGATTCCGC CACGCGGCAT
GAAGTCATTG AGTTCTGCCA GATACTGGGC GCCCACATTG TGGATGTCAC GCGGGACGCC
CTGACCATTG AAGTGACGGG AGGCGAGTAC AAGATAGACC GTTTCCTGTC CCTCATTGAG
GATTATGATG TGCAGATGCT GACCCGGAGC GGCCGTATCG CCCTTCCCAA ACCCTGTCAG
TAA
 
Protein sequence
MTRHTISVLV ENKFGVLARI AGLFSGRGYN IHSLNVAPSQ DPRFSRMTIV VREKEDVLDQ 
IIKHLEKLVN TVEVVDFRNT DNVYRETVLT RIGVDSATRH EVIEFCQILG AHIVDVTRDA
LTIEVTGGEY KIDRFLSLIE DYDVQMLTRS GRIALPKPCQ