| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0808 |
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| Symbol | |
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| ID | 6274369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 947915 |
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| End bp | 951610 |
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| Gene Length | 3696 bp |
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| Protein Length | 1231 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612858 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001877422 |
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| Protein GI | 187735310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTA CTTATCCGGA TCTACCCATT TCCCGCCGCC GGAATGACAT TCTGGCGGCA
ATGCGGGAGC ACCAGGTCAT TGTCGTAGTG GGGGAGACGG GATCCGGTAA GACTACCCAG
CTCCCTAAAA TGGCCATGGA GCTTGCCGGG GAGGCGCGGG GCAGAGTAGG ATGCACCCAG
CCCAGAAGGC TGGCTGCTGC TTCCGTTTCC CGCCGAGTGG CGGAGGAATT GAACTGCGAC
CTGGGAGGTT TGGTGGGTTA CCAGGTGCGC TTTGAGGAAA AAGCCGGGCT GGATACGCGC
CTGAAGTTCA TGACGGATGG GATTCTTCTG GCGGAAACGC AGCATGATCC GGATCTGCGC
CAATATCATA CCCTGATTTT GGATGAGGCG CATGAACGCA GCCTCAACAT TGACTTTTTG
CTCGGCTATC TGCGGCTTTT GCTGGGCAGG CGGAGAGACT TGCGGCTGGT CATCAGTTCC
GCGACGCTGG ATGCCGGCGG GTTTTCCGAA TTCTTTGGAG GCGCGCCTAT TATTCAAGTA
GAAGGCCGCA CTTATCCGGT GGACTTCCAC TATCTGCCGC CGCTGCATGA CGATGAGGAA
CTTCCGGCTC ATGTGGCGCG TGCCGTGGAT TGGCTGGATA CTCTGGACGA CCGCGGGGAT
GTGCTTGTCT TCCTTCCCGG AGAACGCGAA ATACGTGAGG TGGCGGAAAA ACTGGAAGGC
CGGAATCTGA GAAACACGCG CATTCTGCCT TTGTTCGCCA GGCTGGGCCT GGCGAACCAG
CAAAGGATTT TTCATCCGGA GCAGGGATAC CGCCGCATCG TGCTGGCTAC AAATGTGGCG
GAAACGTCCC TGACAATCCC CGGCATCATT TATGTTATTG ACTCCGGCCT GGCGCGCGTC
AGCCGCTATA GCCCGGCACG CCAAGTGCAG CGGCTTCAGA TAGAACCCGT CTCCAAGGCC
AGCGCCCGCC AGCGCGCCGG CCGTTGCGGC CGTGTGTGCG AAGGTGTGTG CATCCGCCTG
TACAGTGAGA AGGACTGGGA GGACAGGCCG GACTTTACGG ACCCGGAAAT CAGGCGCAGC
GCACTGGCCG GGGCGCTGCT CCGGATGAAA GACCTGGGAT TGCCGGAAAT GCCGGAGTTC
CCGCTTCCGG ATCCTCCTTC ATCCAAACTG GTGACGGAAG GTTACCGCAC CTTACGGGAG
ATCGGCGCTC TGGACAAAGC CCGGCAGCTC ACGCCCGTAG GCAGAAAGCT GGCGCGGTTG
CCCATTGACC CGCGGCTGGC CCGCATGCTG CTGGAGGCAC AACATGAACA GGCCCTGCCG
GAAATGCTGG TGATTGTAGC CGGCCTGGGC ATCATGGATC CCCGTGAACG CCCTGCGGAT
GCCGCTCAGA AAGCGGACCA GGCCCACGCG CAGTGGAAGG AAGAAGATAG TGACTTCCTG
TCTCTGCTCA AATTATGGAA GGCTGCATGG CAATTCCGGG AGGGAAGGCG CTGGCGTAAA
AACCAGCTTC GGAAATGGTG CGGGAAAAAT TTCCTCAATT TCAACCGCAT GATGGAATGG
TTCAATTTAT GGGAGGACCT TTCCCGGCTG GTCAGGGAAA CACTGAAATG CAGAATTTCC
CCTTTGGAAG AAGAAACGGA GCGGCAGGCT TCCTTTGCCA TGATTCACCG GAGCATCCTG
GCGGGCGTTC CGCGCCAGTT CGGCCTCTGG GATGCAGACA ACCGGGAATA TCGCGGCGCC
GGAGGACGTT CCTTCGGCAT TTTTCCCGGT TCCGGCCTGT TCCGCCGTAA AAAAAGGAGT
GAATGGGTAA TGGGCGTGGA GTTGGTGGAC ACCACGCGCC TGTGGATGCG CCGCGCCTCC
ATTTTGGAAC CGGGATGGGT GGAGCTGGTA GCGCCCCATC TGTGCGAATC ACACTATTCC
GGAGCGCGGT GGGACAGGGA GCAGGGGGCT GTTTACGCAG TGGAACGCGT CGTGTGCGGC
GGCTTGCGCA TTATTGATAA CAGGCGTGTG CACTATGGCC GTATCAATCC CGCCCATGCG
CGGGAAATAA TGATACGCGA AGGCCTGTTG GGCGGTGGTT TCCGCACGAA ACCCGCCTGT
ATCAGGCATC TGGAAACACT CCGGGAAGAG GTTCGGCAGA TAGAGCTGAA GTTGCGCCGT
CCGGACCAGG TCTGGTGTGA GGAAGGAGTT TTTGAATTCT TTAACAGGCT TGTTCCCCCG
GACTGCTGTA CGGCCAGGGC TTTTTTGCGG TGGGCCGCCG GTATGGAGAA GAAAAACCCG
GAAGCTCTGC ATGTTCCGCC ACAGGAAGCC ATGTACGAAT TCTGGGGGAA AGACCTGCTG
GATGGTTTTC CGGATGAAAT CACCTGTAAA GGAGCGGAAT ATGCCGTGTA TTACCAGAAT
GATCCCGGCG CGGAGGATGA CGGCGTGACC CTGGGCGTCC ACATCGACCA GTTGCCGGAT
ATTCCCGAAT GGTTGCCGGA GTGGGGGGTT CCCGGTCATC TGGCCCAGCG GGCGGAATGC
CTGCTGCGTT CCCTTCCCAA GGATTTGCGC GTCTTTCTCC AGCCTATCAG CCAAAAGGCC
GCTTACTTTG CGGAACTGAG GCATGGCCTG GAACCGGACG GGCCGCTGGC GGGGAAACTG
GCGGAATTTG TGGAAGTGGA AACGGGAAAA TTTTGCGCGC CCTCCTTTTT TGACATGAAC
CGTCTTCCTG CGGAGCTGGT TACGAAAATA TGGGTGTGCG ATGATGAAGG GGAAGAGCTT
GCCATGGGCA CGGATGTTGC GGAACTGAAT AACCGCTTGG GTAAAAAACT TTCCCGTCGG
TTCCAGGAAA CAGCGGAGGA TATCGTGTCC GTAACCGGCA TGAAGGAATG GAGCTGCGGA
GATTTGGAAT ACACGGTGGA TGTGGCGGGA AGGCCGGGTT ATGTGGCTCT GGTGGATGAA
GGAGCATCCG TGGGCGTCCG TGTCTTTGAG GATGAACTGG ATGCTGCGGA ATCCCACCGG
GAGGGGTGCC TGCGTTTCAT GCGCCTGCGC CAGACGGATC AGCTTAACCA TCTCCGCAGA
AAATTTCCGT TGAAGCTGGA AGGAAAGCTC TCTCTTCATA TGCTCGGACG GGAGCCGTCT
ACCAATGCGG AAGACCTGGT GGACGTTGCC GCGGAGATAG CCATGGGCCG TCCTTTGCCG
CGCACGGCGG AGCAATTCGC TGCTGCGGAA ATGAATCTGC GCCAAAACCT TTTTGACGCG
GCGCATAACG TGGCGGATAT ATGGGAACTG GTGGCGGGTA CGGAACATGC CGTCAGGGAC
TTTACGGCGC TGCAAAAGGG TGTGCGCCAT ACGGAGCGCA TTACGGCTGA CCTTCAGCGC
CAGCTTGACT GGTTGTTACG CCCCCGTTTC CTGTGGGCGC ATGGAGCGGA ACGCTTGCCG
GACCTGAAAC GGTACATGCA GGGAATTGCG GAGCGTATCA GACGCATCGG CCAGCAACCC
CTTGCCAGGG AATTGGAACG CCTGGACCTC TTCGAACGCG TGTATTTTCC CTGGCATCAG
GTTTTGAAGG AACATGCCGG AGACCTGCGC TGGATGCAAT ACGGTTATTT GCTGGAAGAA
TACCGCCTGG CCGTTTTCGC TCCCGCCATC TCCGTCAAGG GCCGCGTCTC CGAAAAACGT
CTGGTGGCTT CTTTTGAGGC ATTGTCAAGC CAGTAA
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| Protein sequence | MNITYPDLPI SRRRNDILAA MREHQVIVVV GETGSGKTTQ LPKMAMELAG EARGRVGCTQ
PRRLAAASVS RRVAEELNCD LGGLVGYQVR FEEKAGLDTR LKFMTDGILL AETQHDPDLR
QYHTLILDEA HERSLNIDFL LGYLRLLLGR RRDLRLVISS ATLDAGGFSE FFGGAPIIQV
EGRTYPVDFH YLPPLHDDEE LPAHVARAVD WLDTLDDRGD VLVFLPGERE IREVAEKLEG
RNLRNTRILP LFARLGLANQ QRIFHPEQGY RRIVLATNVA ETSLTIPGII YVIDSGLARV
SRYSPARQVQ RLQIEPVSKA SARQRAGRCG RVCEGVCIRL YSEKDWEDRP DFTDPEIRRS
ALAGALLRMK DLGLPEMPEF PLPDPPSSKL VTEGYRTLRE IGALDKARQL TPVGRKLARL
PIDPRLARML LEAQHEQALP EMLVIVAGLG IMDPRERPAD AAQKADQAHA QWKEEDSDFL
SLLKLWKAAW QFREGRRWRK NQLRKWCGKN FLNFNRMMEW FNLWEDLSRL VRETLKCRIS
PLEEETERQA SFAMIHRSIL AGVPRQFGLW DADNREYRGA GGRSFGIFPG SGLFRRKKRS
EWVMGVELVD TTRLWMRRAS ILEPGWVELV APHLCESHYS GARWDREQGA VYAVERVVCG
GLRIIDNRRV HYGRINPAHA REIMIREGLL GGGFRTKPAC IRHLETLREE VRQIELKLRR
PDQVWCEEGV FEFFNRLVPP DCCTARAFLR WAAGMEKKNP EALHVPPQEA MYEFWGKDLL
DGFPDEITCK GAEYAVYYQN DPGAEDDGVT LGVHIDQLPD IPEWLPEWGV PGHLAQRAEC
LLRSLPKDLR VFLQPISQKA AYFAELRHGL EPDGPLAGKL AEFVEVETGK FCAPSFFDMN
RLPAELVTKI WVCDDEGEEL AMGTDVAELN NRLGKKLSRR FQETAEDIVS VTGMKEWSCG
DLEYTVDVAG RPGYVALVDE GASVGVRVFE DELDAAESHR EGCLRFMRLR QTDQLNHLRR
KFPLKLEGKL SLHMLGREPS TNAEDLVDVA AEIAMGRPLP RTAEQFAAAE MNLRQNLFDA
AHNVADIWEL VAGTEHAVRD FTALQKGVRH TERITADLQR QLDWLLRPRF LWAHGAERLP
DLKRYMQGIA ERIRRIGQQP LARELERLDL FERVYFPWHQ VLKEHAGDLR WMQYGYLLEE
YRLAVFAPAI SVKGRVSEKR LVASFEALSS Q
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