| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0806 |
|---|
| Symbol | |
|---|
| ID | 6274371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 945359 |
|---|
| End bp | 947107 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642612856 |
|---|
| Product | H(+)-transporting two-sector ATPase |
|---|
| Protein accession | YP_001877420 |
|---|
| Protein GI | 187735308 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.580888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTA CACGCTCGGG ATTCACCAAA CTTGCAGCCG TCTGCATTGC CATTCTTCTG
GGGGCGGTGG TCTGGGAGCT GGGCTGGCCC CTGACGCGGG CGGAACATGA GTGGTCGCGG
CTGATTGCAG CCGTTGCCAC GCTGGGCCAC CTGACGGGCA TTCTGGGTTC CTATTTCCGG
AAGGAAATCA ACCGCCCTTC CCTGAGGCTC CTGATTTTCC AAATCATCAG CTGCCTCATG
ATTTTTCTCC TGATTGCCAG GGAACAACAG GAAGCGGGAT ACATGAGGTT CACGGAGCTT
TCCCGCCTGG TGATTACGGC CGGGCTGATT GCCATCCCCA CGCTGATGTC CCTGACCAGG
ATTTTTGAAT GGCTGGTGGG CAAGCAAAAA AAAGGCCGGC CTCTTATGGC CCCCGCCATG
CAGTTTGTAG CTTCTCTGGG AGTAGTCATC CTGGCAGGCA CCGGATTGCT TCTGCTGCCT
AATTCCACAT ATCCGGGTAT TACACTCAGT TTTACGGATG CCCTGTTCAC CAGCACCAGC
GCAGTATGCG TCACCGGTCT GAACGCCGTG GATTTTGCCC ATACTTTCAC CCCGCTGGGA
GAAATGTTCA CGCTTGCCCT TATCCAGATT GGCGGATTCG GCATCATGAC GTTCGCCTAC
TTCGTAGCCA TGATGGCAGG CCAGGGTTTT TCCCTGAGGG ACCGCGTGCT GCTGACGGAT
CTGCTTGATG AAGACAACCT GGGGGCCGTC GTCTCCTTTA TTACCACTAT TGTGGTCAGT
ACGCTGTTCA TCGAACTGTG CGGCGCCGTC CTTCTTTATT TCTCCTGGGA AGGGAAGGAC
ATCAACCTGA TGGGGGAGCC TTTGTGGTGG CATTCCCTGT TCCACTCCGT TTCCGCCTTT
TGCAATGCTG GTTTTTCAAC TTTCCCGATG AATTTGATGG AGCCGGGCAT CCGCCTGTGC
TACAGCGGGC AGGCGGTCAT CATGGCGCTG ATCGTATGCG GCGGCCTGGG ATTCGGCATT
TACAAGGAAA TCAATTCACG CCTGGCAAAC CGCTTTTTTT CCAAACACCG CCGCCTGCAC
ATGCAGTGGA CCCCTTATTT CAAACTGGTG ATGATCTCCA CGGGGATTTT GCTGGCGGGA
GGCGCCCTGG CCATCTTTGC CGTTTCCTCT CCCCATGCCG CGGAACCGTT GGGGGAACAC
CTCTGGATTT GCCTTTTCGA CAGCGTCACG GCACGCACGG CGGGATTCAA TATCAGCGAC
TACGGCCGCT ATCTGCCCGC AGCCAGCCTC ATTATGTGCG GTCTGATGAT GGTGGGAGGC
AGCCCCGGCG GCACGGCAGG CGGCATGAGA ACCACTACCT GCGCCATTGC AGGTGCGGAA
ATCCTGCGCA TCCTACGCGG CAGGGATCAT GTGGAATTCT TCCGCCGCCG CATCGACCAG
CGCACCGTGG CGCGCTGCGT AATTACCGTG GTGGTCTCCT GCGCCTGGAT CGGCTGCTTT
ACCGTCCTGA TTTGCGCCTT GGAGCCCTCC ATGAGCTCTC TGGATATCTT CTTTGAAAAC
TGCAGCGCTT TTGCTACGGT AGGCGTGTCG CGGGGCATTA CTCCAGATTT AAGCGGCCCT
TCCAAATACC TTCTTATCGT CAACATGCTC GCCGGCCGCG TGGGGCTCTT CGCTTTTCTC
ATTGCGCTGG CCGGCACCCC TACTCCGAGG CATTACCGCT ATCCATCCGT CAAAATCCCG
TTAACCTGA
|
|---|
| Protein sequence | MTTTRSGFTK LAAVCIAILL GAVVWELGWP LTRAEHEWSR LIAAVATLGH LTGILGSYFR
KEINRPSLRL LIFQIISCLM IFLLIAREQQ EAGYMRFTEL SRLVITAGLI AIPTLMSLTR
IFEWLVGKQK KGRPLMAPAM QFVASLGVVI LAGTGLLLLP NSTYPGITLS FTDALFTSTS
AVCVTGLNAV DFAHTFTPLG EMFTLALIQI GGFGIMTFAY FVAMMAGQGF SLRDRVLLTD
LLDEDNLGAV VSFITTIVVS TLFIELCGAV LLYFSWEGKD INLMGEPLWW HSLFHSVSAF
CNAGFSTFPM NLMEPGIRLC YSGQAVIMAL IVCGGLGFGI YKEINSRLAN RFFSKHRRLH
MQWTPYFKLV MISTGILLAG GALAIFAVSS PHAAEPLGEH LWICLFDSVT ARTAGFNISD
YGRYLPAASL IMCGLMMVGG SPGGTAGGMR TTTCAIAGAE ILRILRGRDH VEFFRRRIDQ
RTVARCVITV VVSCAWIGCF TVLICALEPS MSSLDIFFEN CSAFATVGVS RGITPDLSGP
SKYLLIVNML AGRVGLFAFL IALAGTPTPR HYRYPSVKIP LT
|
|---|
| |