Gene Amuc_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0791 
Symbol 
ID6274389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp928722 
End bp929969 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content58% 
IMG OID642612842 
ProductRadical SAM domain protein 
Protein accessionYP_001877406 
Protein GI187735294 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA TTACCAGACT TTGGACAGGG GCGGAACAGC CCGCGGACCA TTTGAGATAC 
GGACAGGGCC ACGGGCACGG TCGTTTTGCA GGGGGCGCCG TGGAATCCTG TGCACCGGCT
TCGTCCCGTG CGCGCAAGCC CATTGTGGTG TGGAATATTA CGCGTACCTG CAATCTCAAA
TGCGTGCATT GTTATGCAGA CGCCTCTGCC CGGAAATTTA AGGGAGAGCT GGATTGGGAC
CAGTGTTGCG CGGTCATTGA TGATCTGGCG GACTACAAGG TGAATGCCCT ACTTTTTTCC
GGAGGGGAGC CGCTGGTGCA TCCGCGCTTT ATGGAACTGC TGGAACGTGC CACTGGAAAA
GGGCTGAAGG TGACCATTTC CACAAACGGC ACCCGTATTA CGCCGGAAGC TGCAGCGCGG
TTCAAGGAAT TGGGCGTGGC GTACGTAGGC ATTTCCCTGG ACGGCATTGG CGCCGTTCAT
GACAAATTCC GCGGTGTGGA AGGTTCTTTT GAGCAGGCGG TGCGCGGATT CAGGCTTTGC
AGTGAAGTGG GGCAAAAGAC AGGCCTGCGC CTGACGCTGA CCCGCAACAA TGTGCAGTGC
ATGGGCCAGA TTTTGGATTT TATTGACGCC AACGACATCC AGCGCGTCTG TTTTTACCAT
CTGGTCCCCA CTGGCCGCGG CGTGGAAGTG CAGACCCTGA CTCAGGAGGA AGCAAGGAAT
GCCATGGATA CGCTGATTGC CCGTGTAGAG GAATGGAAAG CGGAGGGAAA AAACCGTGAA
GTGCTGACTG TAACCCAGCC TGCGGACGGA ATTTACCTGC TTCTGCGTCA GCTCCGGGAA
GGCTCCCCTC TGGCGAAGGA AACCCTCGGC CTGCTTCAAT GGAATGGCGG CGGCGCGAAC
AGTTCCGGCC GGGGCATCGC CAATATTGAC ACACAGGGTG CCGTGCATCC GGACCAGTTC
TGGCAATCCG TTACTCTGGG CAATGTGAAA AGTGACCGGT TTTCCGATTT ATGGGATGCC
AGGGCCGGAG CTGCAGCGGA AATGTTGCCT GAGCTGCGCG GTTCCGACGA TCCTCTGGAA
CGGCAGAAGA AGATTGAAGG CCGTTGCGGC CGCTGCGTTC ACTTCGCCCT GTGCGGCGGA
GGCTTCCGCA CCCGTGCCGC GTTTGCCAAC GGACACTGGT ACGGGTCCGA TCCCGGCTGC
TATCTGACGG AAGAGGAAAT TTCCACCCCT TTGCCGGAAA TCAAGTAG
 
Protein sequence
MINITRLWTG AEQPADHLRY GQGHGHGRFA GGAVESCAPA SSRARKPIVV WNITRTCNLK 
CVHCYADASA RKFKGELDWD QCCAVIDDLA DYKVNALLFS GGEPLVHPRF MELLERATGK
GLKVTISTNG TRITPEAAAR FKELGVAYVG ISLDGIGAVH DKFRGVEGSF EQAVRGFRLC
SEVGQKTGLR LTLTRNNVQC MGQILDFIDA NDIQRVCFYH LVPTGRGVEV QTLTQEEARN
AMDTLIARVE EWKAEGKNRE VLTVTQPADG IYLLLRQLRE GSPLAKETLG LLQWNGGGAN
SSGRGIANID TQGAVHPDQF WQSVTLGNVK SDRFSDLWDA RAGAAAEMLP ELRGSDDPLE
RQKKIEGRCG RCVHFALCGG GFRTRAAFAN GHWYGSDPGC YLTEEEISTP LPEIK