| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0787 |
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| Symbol | |
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| ID | 6274393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 923535 |
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| End bp | 924410 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612838 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_001877402 |
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| Protein GI | 187735290 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.565548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCGG AGAACGAGAA CTGGGGAGAT ACGGTACGGA ATCATCTGTT TGACCAGCGC
AGCGCCGTCA TGGTGCACTG GCTGATTCTG CTCAATGTAG TCATCTTTAT CCTGGGATTC
TTCTTCCAAG TGGACATCCC AAGGAATATT TACCCGCCTG TCCATTTGGA CTTGATCCAG
CTTTACGGAG CTTACAGCGA ATATACGTGC TTTCACGAGG GGGAATTATG GCGGTTGCTT
ACCTATCAGT TTCTTCACGC CAATCTGGGG CACATCATGT TCAACATGAT TGCCCTGTGG
TTTTTCGGCC CGGTTGTAGA AGAACGTTTC GGCCATTGGC GCTTCCTGCT GTATTACCTG
TTTTGCGGCG TGGCTGCAGC CCTGTTTTCC TCCCTGCTGG GGTACATGGG ATTTTTTGAT
CCGGAATGGC GCTTCATTCC CATGGTGGGG GCCTCAGGTT CCATTTACGG CATCATGGCC
GCATGCGCGG TGCTCTTTCC CCATGCCCGG GTACAGCTTC TGTTTCCTCC GGTTAATTTG
AGCGTGCGCC AGTTTGCCCT GGCCGTTCTC GGAGTCGCCG CAGCCGTCAT TATCTTCCAA
TGGAACAATG CGGGCGGGGA AGCCGGCCAT CTGGGCGGCA TGTTCGCCGG ATTTATTCTG
ACATTGCTGA TTTTATGGAA GGAAAAGATG TCTTCCCCAA GACGGAAAGC CGCCTCTTCT
TCCCACTATT CCCCTGAGCC TTCCAGCCGC CGCCCGGCAC AGGCTTACCC CTCTGAAAAG
GAGGTGGATG AAATCATGGA AAAAATATCC AGGTCCGGCC TGTCCAGCCT GACGGAGGAG
GAACGGGAAA TTCTCCGGCG CGCTTCCCGG CGCTGA
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| Protein sequence | MRAENENWGD TVRNHLFDQR SAVMVHWLIL LNVVIFILGF FFQVDIPRNI YPPVHLDLIQ
LYGAYSEYTC FHEGELWRLL TYQFLHANLG HIMFNMIALW FFGPVVEERF GHWRFLLYYL
FCGVAAALFS SLLGYMGFFD PEWRFIPMVG ASGSIYGIMA ACAVLFPHAR VQLLFPPVNL
SVRQFALAVL GVAAAVIIFQ WNNAGGEAGH LGGMFAGFIL TLLILWKEKM SSPRRKAASS
SHYSPEPSSR RPAQAYPSEK EVDEIMEKIS RSGLSSLTEE EREILRRASR R
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