Gene Amuc_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0786 
Symbol 
ID6274396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp922410 
End bp923450 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content62% 
IMG OID642612837 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001877401 
Protein GI187735289 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.766531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TTATCATCGG CCAGGGAATT GCCGGAAGTT GTCTGGCGTG GGAATTGAAA 
CGCCGCGGCG CGGAGTTTAC GGTTGCAGAC CGCCCCGTAG CGGAAACGGC CTCCCGGGTG
GCGGCCGGAT TGGTAAACCC CCTGACGGGC CGCGCCTTCC GCCCCGGATG GAGGCAGGAA
GAATGCCTGG CGGCGGCAGA GGCCTTTTAC CCGGAGACGG AACGGGAATT AGGCGGGTCC
TGGTGGCAGA AAACTCCGAT TTTCCGGGAA GTGGAGACGG AAGACCAGTT TGAAATCTGG
CAGGAACGCC AGACGGCTCC GGAATCCTGC GCCTATGCCG GACCTCTTTT TCCATGGCCG
GAACACTGGG AAGGCCGCGG GAAAGCCGCC TATACGCGAG GTTCCGCCGT GCTGCACGTG
GAAAACATGG TCACTGCTAT GCGGCGTTTT TTTATGGAAC AGGGCCGTTT TGTGGAAGCG
GATGTATCCC CCACAGATAT CCGGCCGGAT GCAAACGGTC TTTTCCATTG GAACGGTCGC
ACGTTTTCCC ACATAGTCTG GTGTACCGGC TGGGAAGCCG GGCTTCATCC GGACATGTCT
CCGCTGAAGG GGCGCCCCTC CAAAGGAACC ATTCTGGACT TGGACTTGAA AGAGCTGGAC
TGGCATGCCG GCATCCTGCA TTTCGGACAC TGGCTGGTTC ATAACGGTTC TTTCTGGCGC
TTCGGGGCCA CCTACGCGTG GGCGTGGGAT GCTCCCGGCA TTCCGGAAGC CCCCGCCGTC
CAGGAATTGA TGCTGGACCT TGTTAAACGC TATTCCGGGA ACATGGACGT CATCCGCGCC
CGTGCCGCCG TCCGCCCCAT CATCCGCCGC AGCCAACCGG TCGCCGGTCC CATTCCCGGG
CTGGACGGTC AGTTCGTCTT CTCCGGGCTG GGCAGCAAGG GGGTGACCAC TTCCCCCTGG
TCCGCCGCCC AGCTTGCCGG ACATCTCGTG TGCGGAACGG ATCTGCCGCC GGATCTGCTA
CCTGCCGCGC TCTGGAAATG A
 
Protein sequence
MNILIIGQGI AGSCLAWELK RRGAEFTVAD RPVAETASRV AAGLVNPLTG RAFRPGWRQE 
ECLAAAEAFY PETERELGGS WWQKTPIFRE VETEDQFEIW QERQTAPESC AYAGPLFPWP
EHWEGRGKAA YTRGSAVLHV ENMVTAMRRF FMEQGRFVEA DVSPTDIRPD ANGLFHWNGR
TFSHIVWCTG WEAGLHPDMS PLKGRPSKGT ILDLDLKELD WHAGILHFGH WLVHNGSFWR
FGATYAWAWD APGIPEAPAV QELMLDLVKR YSGNMDVIRA RAAVRPIIRR SQPVAGPIPG
LDGQFVFSGL GSKGVTTSPW SAAQLAGHLV CGTDLPPDLL PAALWK