Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0786 |
Symbol | |
ID | 6274396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 922410 |
End bp | 923450 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642612837 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001877401 |
Protein GI | 187735289 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.766531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC TTATCATCGG CCAGGGAATT GCCGGAAGTT GTCTGGCGTG GGAATTGAAA CGCCGCGGCG CGGAGTTTAC GGTTGCAGAC CGCCCCGTAG CGGAAACGGC CTCCCGGGTG GCGGCCGGAT TGGTAAACCC CCTGACGGGC CGCGCCTTCC GCCCCGGATG GAGGCAGGAA GAATGCCTGG CGGCGGCAGA GGCCTTTTAC CCGGAGACGG AACGGGAATT AGGCGGGTCC TGGTGGCAGA AAACTCCGAT TTTCCGGGAA GTGGAGACGG AAGACCAGTT TGAAATCTGG CAGGAACGCC AGACGGCTCC GGAATCCTGC GCCTATGCCG GACCTCTTTT TCCATGGCCG GAACACTGGG AAGGCCGCGG GAAAGCCGCC TATACGCGAG GTTCCGCCGT GCTGCACGTG GAAAACATGG TCACTGCTAT GCGGCGTTTT TTTATGGAAC AGGGCCGTTT TGTGGAAGCG GATGTATCCC CCACAGATAT CCGGCCGGAT GCAAACGGTC TTTTCCATTG GAACGGTCGC ACGTTTTCCC ACATAGTCTG GTGTACCGGC TGGGAAGCCG GGCTTCATCC GGACATGTCT CCGCTGAAGG GGCGCCCCTC CAAAGGAACC ATTCTGGACT TGGACTTGAA AGAGCTGGAC TGGCATGCCG GCATCCTGCA TTTCGGACAC TGGCTGGTTC ATAACGGTTC TTTCTGGCGC TTCGGGGCCA CCTACGCGTG GGCGTGGGAT GCTCCCGGCA TTCCGGAAGC CCCCGCCGTC CAGGAATTGA TGCTGGACCT TGTTAAACGC TATTCCGGGA ACATGGACGT CATCCGCGCC CGTGCCGCCG TCCGCCCCAT CATCCGCCGC AGCCAACCGG TCGCCGGTCC CATTCCCGGG CTGGACGGTC AGTTCGTCTT CTCCGGGCTG GGCAGCAAGG GGGTGACCAC TTCCCCCTGG TCCGCCGCCC AGCTTGCCGG ACATCTCGTG TGCGGAACGG ATCTGCCGCC GGATCTGCTA CCTGCCGCGC TCTGGAAATG A
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Protein sequence | MNILIIGQGI AGSCLAWELK RRGAEFTVAD RPVAETASRV AAGLVNPLTG RAFRPGWRQE ECLAAAEAFY PETERELGGS WWQKTPIFRE VETEDQFEIW QERQTAPESC AYAGPLFPWP EHWEGRGKAA YTRGSAVLHV ENMVTAMRRF FMEQGRFVEA DVSPTDIRPD ANGLFHWNGR TFSHIVWCTG WEAGLHPDMS PLKGRPSKGT ILDLDLKELD WHAGILHFGH WLVHNGSFWR FGATYAWAWD APGIPEAPAV QELMLDLVKR YSGNMDVIRA RAAVRPIIRR SQPVAGPIPG LDGQFVFSGL GSKGVTTSPW SAAQLAGHLV CGTDLPPDLL PAALWK
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