| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0777 |
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| Symbol | |
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| ID | 6274407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 914942 |
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| End bp | 915841 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612827 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001877392 |
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| Protein GI | 187735280 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG AAGGTACTAA CGAAATACAG GACCCGCGCG GTGAATTCCA ACAGGAAAGA
TATGAAAAGC AGCAGCAGAA AGCCCCCGGA CTGCAATCCG GAATGAAGCC CGTGCCGGAT
TCCGGGGAAC AAAGCTACCA TGGCTGCAAC AGGCTCCGTG GACGAAAAGC CCTGGTCACA
GGGGGAGACT CGGGAATAGG CCGGGCGGCG GCTATTGCCT ACGCACGCGA AGGAGCCGAC
GTAGCCTTGA ACTACCTTCC TGAAGAACAA AGCGATGCCG AAGAAGTGGC GGAACTCATC
AGAAAAGAGG GCCGGAAGGC CGTCCTGCTG CCGGGGGACC TCAGCGATGA AGTCTTTTGT
AAAAAACTCG TCAGGGATGC CTTGGAAAAA CTTGGCGGAC TGGACATCAT GGCCCTGGTA
GCCGGTAAAC AAGTGGCGGT GGAAGATATC CGGGACATTA CCACGGAACA ATTAACCAAG
ACATTTGAAG TAAACGTGTT CTCCCTGTTC TGGATTGCCA AGGAAGCCCT TCCGCATCTC
AAGCCGGGGA CGAGCATCAT TACCTGCTCC TCCATTCAGG CCTACCAGCC CGGCAAGAAC
CTGGTGGACT ATGCTTCCAC AAAAGCGGCC ATCATTGCGT TCAGCCGCTC CCTGGCCAAG
CAGGTTGCCC CCAAAGGCAT CCGGGTCAAC GTGGTGGCTC CCGGCCCCAT CTGGACAGCC
CTGCAAGTAA CCGGAGGCCA GCTGCAGAAG GATCTGCCGG AATTCGGACG GAAAACGCCT
CTCAAAAGGG CAGGGCAACC TGTGGAACTC TCCGGACTAT ACGTCTTTCT CGCCTCCCAG
GAATCCAGCT TCATTACTGC GGAGGTCTTT GGCGTTACCG GCGGCATGCA TCTGGCCTGA
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| Protein sequence | MSTEGTNEIQ DPRGEFQQER YEKQQQKAPG LQSGMKPVPD SGEQSYHGCN RLRGRKALVT
GGDSGIGRAA AIAYAREGAD VALNYLPEEQ SDAEEVAELI RKEGRKAVLL PGDLSDEVFC
KKLVRDALEK LGGLDIMALV AGKQVAVEDI RDITTEQLTK TFEVNVFSLF WIAKEALPHL
KPGTSIITCS SIQAYQPGKN LVDYASTKAA IIAFSRSLAK QVAPKGIRVN VVAPGPIWTA
LQVTGGQLQK DLPEFGRKTP LKRAGQPVEL SGLYVFLASQ ESSFITAEVF GVTGGMHLA
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