| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0775 |
|---|
| Symbol | |
|---|
| ID | 6274409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 913422 |
|---|
| End bp | 913889 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642612826 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001877391 |
|---|
| Protein GI | 187735279 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1607] Acyl-CoA hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA CATATCGTCA TGCCCAGCTT CCGGAAGGGC GCGTTCCCGC CCTGCGCGTG
GAACCAATGC CTGCGGATAC CAATCAGAGC GGGGAAGTAT TCGGCGGCTG GGTGATGAGC
CAGGTGGACC TTGCAGGAGC CAATACCGCC ATGCGCTATG CATTGAGCCG CTATATTGTG
ACGCGTGCGG TGAGCAGCCT GACGTTTGAA GCTCCTGTGC TGGTGGGCGA TGTAGTGTCC
TTTTATACGG ATATTATCAA GGTGGGCCGC ACCTCCGTCA CCGTGAAGGT GGAGGTGTAT
GCGGAACGTC TGACGAAGCT TTGCAATAAC ATTGCCAAAA TTACAGAGGC GGAGCTGGTT
TATGTAGCCC TGGGGGAGGA TAAGAAACCG ATTACCCTGG AAGAGTCCCG CGCCCGGTTT
GCGCAGTGCT GTTCTCTTGA GACGGGAGAT TCCTCTTCCT GTTCCTGA
|
|---|
| Protein sequence | MENTYRHAQL PEGRVPALRV EPMPADTNQS GEVFGGWVMS QVDLAGANTA MRYALSRYIV
TRAVSSLTFE APVLVGDVVS FYTDIIKVGR TSVTVKVEVY AERLTKLCNN IAKITEAELV
YVALGEDKKP ITLEESRARF AQCCSLETGD SSSCS
|
|---|
| |